Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq6372 199 6e-46 seq163424 159 5e-34 seq26 143 4e-29 seq11470 122 1e-22 seq21230 100 4e-16 seq14 87.8 3e-12 >seq6372 Length=86001 Score = 199 bits (220), Expect = 6e-46 Identities = 225/298 (76%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 122363 ATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCAGAC 122422 |||||||| || || ||| | |||| |||| ||||| |||| | || | |||| Sbjct 39861 ATGAAACAGTACCTCGACCTGATGCGCCACGTGCGTGAGCACGGCACCTTCAAGGAAGAC 39802 Query 122423 CGTACGGGCACGGGCACC--CTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAA 122480 ||||| |||||||||||| | | ||| |||||| || ||||| || |||||| Sbjct 39801 CGTACCGGCACGGGCACCTACAG-CGTG-TTCGGCTACCAGATGCGTTTCGACCTGGCCG 39744 Query 122481 AAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTC 122540 | |||||||| | ||||| ||||| ||| ||||| ||||| |||||||| ||||| | Sbjct 39743 ATGGTTTCCCCATCGTCACCACCAAGAAGTGCCACCTGCGCTCGATCATCCACGAGCTGC 39684 Query 122541 TGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCT 122600 ||||||||||| |||||| ||||||||| |||| || || |||||| |||||| |||| Sbjct 39683 TGTGGTTCCTCCAGGGCGACACCAACATCAAGTACCTCAAGGACAACGGCGTCAGCATCT 39624 Query 122601 GGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 |||| || ||||| || || | || || ||||||||||| ||||| | || ||||| Sbjct 39623 GGGACGAGTGGGCCGACGAGAACGGCAACCTCGGCCCGGTCTACGGCTACCAGTGGCG 39566 >seq163424 Length=1083 Score = 159 bits (176), Expect = 5e-34 Identities = 218/299 (73%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 122362 CATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCA-G 122420 ||||||||||||||| ||| | |||| |||| || || ||||| ||| ||| | Sbjct 698 CATGAAACAATATCTCGACCTGATGCGCCACGTGCGCGAGAACGG-CACCTTTAAGAGTG 756 Query 122421 ACCGTACGGGCACGGGCACCCTGTCGT-TATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 | || || ||||| ||||| | || | || ||| || ||||||||||| ||| Sbjct 757 ATCGCACCGGCACCGGCACT-TACAGTGTGTTTGGCCATCAGATGCGCTTTGATCTGGCC 815 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 | || || |||||||| || ||||| ||| ||| ||| ||||||||||| ||||| Sbjct 816 GAGGGCTTTCCGCTGGTGACCACCAAGAAGTGTCATCTCAAGTCCATCATCCACGAGCTG 875 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 |||||||| | ||||||||||||||||| ||||||||| || ||| |||| ||| Sbjct 876 CTGTGGTTTTTGCAGGGCGATACCAACATCCGGTATCTGAAGGAAAACGGCGTCTCCATC 935 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||| || |||||||| || |||| | || || ||||| || || | || ||||| Sbjct 936 TGGGACGAGTGGGCAGACGAGAATGGCGACCTGGGGCCGGTCTATGGCTATCAGTGGCG 994 >seq26 Length=549101 Score = 143 bits (158), Expect = 4e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 ||||| || ||||| |||||| ||| | |||||| || |||||||| |||||| Sbjct 240152 GACCGCACCGGCACCGGCACCTACTCGGTGTTCGGCCACCAGATGCGCTTCGACCTGGCC 240211 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 |||| |||||| || | || ||||| ||| | ||||| || |||||||| || || Sbjct 240212 GAAGGCTTCCCGGTGCTGACCACCAAGAAGCTGCACCTGAAGTCGATCATCCACGAACTG 240271 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 ||||||||||| |||||| |||||||||| || ||||| || || ||| | ||| Sbjct 240272 CTGTGGTTCCTGCAGGGCGACACCAACATCCGCTACCTGAAGGAACACGGCGTGCGCATC 240331 Query 122600 TGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||| || ||||| || || | || | ||||| ||||| ||||| | || ||||| Sbjct 240332 TGGGACGAGTGGGCCGACGAGAACGGCGACCTCGGACCGGTCTACGGCTACCAGTGGCG 240390 >seq11470 Length=53368 Score = 122 bits (134), Expect = 1e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 |||||||| || || || || | ||| |||| || |||||||| ||||| || Sbjct 34883 GACCGTACAGGTACAGGTACACGTTCGGTATTTGGTCATCAAATGCGTTTTGATCTTTCT 34824 Query 122480 AAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTT 122539 |||||||| || | | || || || || |||||| | || || || | ||||||| Sbjct 34823 AAAGGTTTTCCATTACTAACCACTAAGAAAGTTCACTTTCGTTCAATTGTAATTGAGCTT 34764 Query 122540 CTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 122599 || |||||||||| || ||||| ||| | || ||||| |||||||| || |||| ||| Sbjct 34763 CTTTGGTTCCTCAAAGGTGATACTAACGTTCAATATCTCAAAGACAATAAAGTCACTATT 34704 Query 122600 TGGGATGAATGGGCA 122614 ||||||||||||||| Sbjct 34703 TGGGATGAATGGGCA 34689 >seq21230 Length=25512 Score = 100 bits (110), Expect = 4e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 122399 GACAACGGGCACGAAAAAGCAGACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCA 122458 |||||||| ||| || | |||||||| || || || || | || |||| || Sbjct 9172 GACAACGGCGGCGACAAGGGCGACCGTACTGGTACAGGAACACGTTCAGTATTTGGTCAT 9113 Query 122459 CAAATGCGCTTTGACCTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTC 122518 |||||||| ||||| | || |||||||| || |||| || ||||| || || || Sbjct 9112 CAAATGCGTTTTGATTTATCTAACGGTTTCCCACTACTCACCACAAAAAAAGTACATTTC 9053 Query 122519 CGCTCCATCATCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTG 122578 ||||| ||| || ||| || || ||||| || | || |||||||| | || || | Sbjct 9052 CGCTCAATCGTCATTGAACTACTTTGGTTTCTTAAAGGTGATACCAATGTTCAATACTTA 8993 Query 122579 AAAGACAACAACGTCAGTATCTGGGATGAATGG 122611 |||||||| || || | || |||||||||||| Sbjct 8992 AAAGACAATAAAGTGACGATTTGGGATGAATGG 8960 >seq14 Length=669857 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 169731 TTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCC 169790 |||||||||||| ||| |||||| ||| ||||||||| ||| |||||||||||||||||| Sbjct 470598 TTGTAGCTCAGTCGGT-TAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGCCC 470656 Query 169791 CGTCA 169795 ||||| Sbjct 470657 CGTCA 470661 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 169731 TTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCC 169790 |||||||||||| ||| |||||| ||| ||||||||| ||| |||||||||||||||||| Sbjct 470706 TTGTAGCTCAGTCGGT-TAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGCCC 470764 Query 169791 CGTCA 169795 ||||| Sbjct 470765 CGTCA 470769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 775880033985600