Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_019933.2 Length=43870 Score E Sequences producing significant alignments: (Bits) Value seq11269 116 1e-21 >seq11269 Length=54388 Score = 116 bits (128), Expect = 1e-21 Identities = 198/283 (70%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 6645 AAGGACACTCAGGGCCGCTACATCCTGGGTAATCCGCAG---GGCACCCTGGCCCCAACT 6701 |||||| | || |||||||||| | || | |||||| |||||| | || || Sbjct 17684 AAGGACGCCGAGAACCGCTACATCATCGGCAGCCCGCAGAACGGCACCA---CTCCGACC 17740 Query 6702 CTGTGGGGTCTGCCGGTTGTTGCAACTCAGGCGATGGCTGTGGGCCAGTTCCTGACCGGT 6761 || ||| || ||||||| || | ||| ||||| || || || | ||||||||||||| Sbjct 17741 CTCTGGCGTTTGCCGGTGGTGGAAACCCAGGCCATCACTCAGGACGAGTTCCTGACCGGA 17800 Query 6762 GCCTTTGATGC-CGGTGCACAGGTCTTTGATCGCTGGGCCGCCCGCGTTGAGGTTGCCAC 6820 | |||| || ||| || ||| |||| || ||| || | ||| ||| |||| Sbjct 17801 G-CTTTCTCGCTCGGCGCCCAGATCTTCGACCGCATGGATATCGAGGTTCTGGTCTCCAC 17859 Query 6821 CGAGAATCAGGATGACTTCATCAAGAACATGGTCACCATCCTGGCCGAAGAGCGCTTGGC 6880 |||||| | | |||||| || |||||||| ||||||| || |||||||| |||| Sbjct 17860 CGAGAACGACAAGGACTTCGAGAACAACATGGTAACCATCCGCGCTGAAGAGCGACTGGC 17919 Query 6881 TCTGGCGGTCTATCGTCCGGAGTCCTTCATCAAGGGTTCCCTG 6923 | ||||||||||| || ||| | || ||| ||||| ||| Sbjct 17920 CTTCGCGGTCTATCGGCCTGAGGCGTTTGTCACTGGTTCGCTG 17962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139962196034624