Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020081.2 Length=149844 Score E Sequences producing significant alignments: (Bits) Value seq1499 84.2 2e-11 >seq1499 Length=182485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 59684 TCCATGTCGTATGCTTCTTTGAAGAAGAACCAGTTTTGAGGAGACAACCCCGGCATCGGG 59743 ||||| |||||||| ||||||| |||| |||| | | | ||| ||||| ||| Sbjct 106547 TCCATATCGTATGCCGATTTGAAGTAGAAGTAGTTATCATTCGTCAAATAAGGCATTGGG 106606 Query 59744 TAGTAAGTCTTACTGTTTCCATATGTTCTTTCTTCGATCTTCTCCATGATCGGCATAACC 59803 |||||||| |||| | |||||| ||| | ||||| | |||| ||| |||||||| Sbjct 106607 TAGTAAGTGGTACTATCTCCATACTCTCTCACCTCGATGATGTCCACGATTGGCATAACA 106666 Query 59804 GAAGCCGTTGCCGAT--TGAACGTAAGAGATCGATCCAGTAGGGGCAATGCATAAACGGT 59861 |||||||| | || | || | |||||| | ||| | || |||||| ||||||| Sbjct 106667 GAAGCCGTCG-CGTTCATG-ATGTAAGAAGTAGATTGGTTCGGAGCAATGGCCAAACGGT 106724 Query 59862 AACTATGATACATGCCG 59878 || ||| || || ||| Sbjct 106725 AAGCATGGTAGATACCG 106741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478292797050240