Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020083.1 Length=157834 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=869209 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/189 (72%), Gaps = 10/189 (5%) Strand=Plus/Plus Query 106020 CCGCTTCTATGACTACGCCAGCACCGGTAAA---TTCAGTCTGCCGACCCCGATCATGGC 106076 |||||||||||| | || | | | | | || |||| |||||||| || || ||| | Sbjct 710725 CCGCTTCTATGA-TGCGACGTCGCTGTTTAAGATTTCA--CTGCCGACACCTATTATGTC 710781 Query 106077 TGGCGTCCGTACCCGTACCCGTCAGTTCAGCTCCTGTGTGCTGATCAAAGTCGGCGACAC 106136 ||||| ||||||| |||||||||||||||||||| || ||||| | || |||| Sbjct 710782 GGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTACTGATTGAGTGTGGTGACAG 710841 Query 106137 GCTGGACTCTATCAAGGCCGCAGGCTCTGCTATCGTTGACTA--TGTCAGCAAGCGCGCA 106194 ||||| || ||||| ||| | | ||| || || | || |||| || |||||||| Sbjct 710842 CCTGGATTCGATCAATGCCACCTCCAGTGCCATTGTAAAATACGTGTC-GC-AGCGCGCA 710899 Query 106195 GGCATCGGT 106203 || || ||| Sbjct 710900 GGTATTGGT 710908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503803193624640