Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020198.1 Length=36947 Score E Sequences producing significant alignments: (Bits) Value seq11269 127 5e-25 >seq11269 Length=54388 Score = 127 bits (140), Expect = 5e-25 Identities = 149/196 (76%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 19077 CCTGATGCATCCAACCACGATCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAGAAAGCC 19136 ||||| || ||||||||| |||||||||||| |||||||||||||||| || | ||||| Sbjct 10026 CCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGACAAAGCA 9967 Query 19137 GGCATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCCT-CAGTGACAGGGTGATGCGCTA 19195 || |||||||||| | ||||||||| |||||||||| ||| | || | ||| | Sbjct 9966 GGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGG-CTTCCGCAA 9908 Query 19196 TTACCTGAGCGAGGACATCA-AGGAGGGCTACCGCCCCGCGCCGTATACCGTCCAGTTCG 19254 |||||| |||| || ||| | || ||| || |||| || ||||| || || ||| Sbjct 9907 CTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTCAATTCT 9849 Query 19255 CCCTGGAGTGCCTGGC 19270 | || || |||||||| Sbjct 9848 CTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117856011440088