Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020200.1 Length=36429 Score E Sequences producing significant alignments: (Bits) Value seq11269 145 2e-30 >seq11269 Length=54388 Score = 145 bits (160), Expect = 2e-30 Identities = 156/201 (78%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 18201 TGACGCCTGACGCCTCCAACCACAATCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAGA 18260 ||| |||||||||||||||||||||||||||||||| |||||||||||||||| || | | Sbjct 10031 TGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGACA 9972 Query 18261 AAGCCGGCATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCCT-CGGTGATAGGGTCATG 18319 |||| || |||||||||| | ||||||||| |||||||||| ||| || | | Sbjct 9971 AAGCAGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGG-CTTC 9913 Query 18320 CGCTATTACCTGAGCGAGGACATCA-AGGAGGGCTACCGCCCCGCGCCGTATACCGTCCA 18378 ||| | |||||| |||| || ||| | || ||| || |||| || ||||| || || Sbjct 9912 CGCAACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTCA 9854 Query 18379 GTTCGCCCTGGAGTGCCTGGC 18399 ||| | || || |||||||| Sbjct 9853 ATTCTCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116201959205512