Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq5 116 3e-21 seq100896 96.9 3e-15 >seq5 Length=869209 Score = 116 bits (128), Expect = 3e-21 Identities = 220/317 (69%), Gaps = 10/317 (3%) Strand=Plus/Minus Query 74954 CAGCATACCTTTGTTCAGTCCAATCATCGACCCGTCTTTGAACAGGAAG-CTGCCCCAGT 75012 ||| ||| |||||||||| ||||||||||| || ||||| ||||| || |||||| ||| Sbjct 713413 CAGAATATCTTTGTTCAGGCCAATCATCGAGCCATCTTTAAACAGATAGGCTGCCC-AGT 713355 Query 75013 CTTTCTCCTGCACCGATGCGTCGATAAATCCCTGTCGT--GCTTCCTCGTGGCAATCTTC 75070 | || || ||| ||| ||| ||||| || ||| | |||||| | ||| |||| Sbjct 713354 CCTTTTCTTGCTCCGCCGCGCGCATAAAGA--TGGCGTAAGATTCCTCTTCGCACTCTTT 713297 Query 75071 TGCCACACGGGCAAA--CAGGTCACCTTCGTTACCGTTCTGCATTTCTTTCAGCATATAC 75128 || | || | | || | | || | |||| | || |||||||||| | Sbjct 713296 GGCAATTTCCGCCATTTCCGG--ATCATCATCACCGCTGGCCAGAATATTCAGCATATGC 713239 Query 75129 TGGGTGCCGGACAAATGCAAGGCTTCATCACGAGCAATCAGTTCGATAATGTTGGTGTTG 75188 || ||||||| | || | |||||||| || |||||||| |||||| || | || Sbjct 713238 TGAGTGCCGGTGAGGTGTAGCGCTTCATCGCGGGCAATCAGCCGGATAATCTTAGCATTC 713179 Query 75189 CCCAGCATTACCCCGCGCTCACCGAAGGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGG 75248 || ||| | | | |||||| | || || || |||||||||||| || || |||||| Sbjct 713178 CCTTCCATCAGCTCACGCTCAGCAAAAGCAAAACTGCAGGCAAAGCTGACATAAAAGCGG 713119 Query 75249 ATCGCTTCCAGTGCGTT 75265 |||||||| | | |||| Sbjct 713118 ATCGCTTCTAATACGTT 713102 >seq100896 Length=2131 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 76532 ACGGCCCTGTACAGAATCCAGGAGGATCTGGTACTTCAGGTTGCTGATGAAGATGTGCTT 76591 |||||| |||||| ||| || || | || || || | ||| || | || |||||||| Sbjct 796 ACGGCCTTGTACACTATCAAGAAGCGTTTGATATTTTAAGTTACTTAAAAATATGTGCTT 737 Query 76592 CTCGTGATCCGGCA--GGTTCATGTAGTCGATTCGGTCACGGGTCACGTTAACTTCTTCA 76649 ||||| || || | | || | |||| | ||||| | || | |||||||||| Sbjct 736 TTCGTGTTCTGGTAACGCTTG--GAAGTCAAGACGGTCTTTACTTACATCAACTTCTTCA 679 Query 76650 GGTCGCCAGAAGAACGCCAGTTGCTTTTCAATCAGCTTCTCGAACTTCGCATGTTTCTGC 76709 || ||||| ||||||| ||||||||||| || ||||| ||||| | | | || || Sbjct 678 GGACGCCAAAAGAACGAAAGTTGCTTTTCGATTAGCTTTTCGAAGATAGGGTACTTTTGT 619 Query 76710 TGGTCGTAGCGAGAAACGTTCGGTGTCTCTCCGAGGAACATCGG 76753 |||||||| || || ||||| || | |||| |||||||| Sbjct 618 TGGTCGTAACGTGACACGTTTACCGTTTGGCCGAAAAACATCGG 575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454362831803040