Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020203.1 Length=37095 Score E Sequences producing significant alignments: (Bits) Value seq11269 134 3e-27 >seq11269 Length=54388 Score = 134 bits (148), Expect = 3e-27 Identities = 151/197 (77%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 19185 GCCTGACGCCTCCAGCCACAACCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAGAAAGC 19244 |||||||||||||| |||||| |||||||||| |||||||||||||||| || | ||||| Sbjct 10027 GCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGACAAAGC 9968 Query 19245 CGGCATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCCT-CAGTGACAGGGTGATGCGCT 19303 || |||||||||| | ||||||||| |||||||||| ||| | || | ||| Sbjct 9967 AGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGG-CTTCCGCA 9909 Query 19304 ATTACCTGAGCGAGGACATCA-AGGAGGGCTACCGCCCCGCGCCGTATACCGTCCAGTTC 19362 | |||||| |||| || ||| | || ||| || |||| || ||||| || || ||| Sbjct 9908 ACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTCAATTC 9850 Query 19363 GCCCTGGAGTGCCTGGC 19379 | || || |||||||| Sbjct 9849 TCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118328597792824