Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq5 168 7e-37 >seq5 Length=869209 Score = 168 bits (186), Expect = 7e-37 Identities = 322/468 (69%), Gaps = 10/468 (2%) Strand=Plus/Minus Query 133739 GGGCTGAACAGTGTGATGTACCCATTTTTACCGAGACGTTCCATCATCAAATCATTGATT 133798 |||||||||| ||||| || ||| |||| || || | ||||| || | Sbjct 711216 GGGCTGAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAAC 711157 Query 133799 TGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAAT 133858 |||| || || || ||||| | | ||||| || |||||||| ||| || || | | Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 133859 ACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 133918 |||| ||| ||| || || |||||||||| || || | || || || ||||||||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 133919 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATT 133978 || ||||||||||| || || ||||||||| ||||| ||||| || | || || || Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 133979 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 134038 ||||||||| |||||||||||| ||| ||| ||| ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 134039 GCGTTGATGCCGATACCAGCTCGCTTGCTGATA--TACTTAATAAT---ACTGTTACTTG 134093 ||||| || || ||||| || ||| ||| || | || || | ||| |||| | || Sbjct 710916 GCGTTAATACCAATACCTGCGCGC-TGC-GACACGTATTTTACAATGGCACTG-GAGGTG 710860 Query 134094 CCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGAC 134153 ||||| || |||| ||| || ||| ||||| | ||| || || || ||||||| Sbjct 710859 --GCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGAC 710802 Query 134154 GAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCT 134201 | || || ||||| | || | |||||| ||||| |||| |||||||| Sbjct 710801 GGGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511424384691360