Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_020483.1
Length=42084
Score E
Sequences producing significant alignments: (Bits) Value
seq4984 84.2 6e-12
>seq4984
Length=100180
Score = 84.2 bits (92), Expect = 6e-12
Identities = 249/377 (66%), Gaps = 8/377 (2%)
Strand=Plus/Plus
Query 15501 AATAGAACCATACAGAGCTAACGCTTATGTACAAAAAACAATGTCAGGTTCTTTTCTAGT 15560
|||||||||||| ||| |||| | ||||||| ||| || |||| || ||| ||||
Sbjct 72740 AATAGAACCATATGCAGCAAACGTATTCATACAAAAGACACTGACAGGCTCATTTGTAGT 72799
Query 15561 TAAGAATAAATATTTAGAAAAGTTACTAG-AGAAAAAAGGCATGAACACTGACGCAGTGT 15619
||||||| || |||| | ||| |||||||| || || || ||| | | |
Sbjct 72800 GCGAAATAAATTCTTGCAAAAACTGTTAGCAGAAAAAAATCAAGA-CAATGATAAAATAT 72858
Query 15620 GGCAATCTATTGTAGCACA-GAGAGGTTCTGTATTACATTTAGATGAACTATCTGATTAT 15678
|| || ||| || | ||| ||||| || ||||||||| || ||| ||
Sbjct 72859 GGTCTTCAATTTCGACAAACGAG-GGTTCCGTTCAGCATTTAGATTTTCTTAGTGAGCAT 72917
Query 15679 GAAAAAGATACATTTAAAACATCTATAGAAATTAATCAGCAATGGATAATAGAACATGCG 15738
|||||| |||||||||||| | || || |||| |||||| |||||||||||
Sbjct 72918 GAAAAATTGACATTTAAAACAGCGTACGAGCTTGATCAAAGATGGATTATAGAACATGCA 72977
Query 15739 GCAGACAGACAACAATTTATATGTCAAGGTCAGTCAGTAAATGTATTTGTACCTGCTGAT 15798
|| ||| | | | | ||||| ||| ||||| ||| | || | ||||| |
Sbjct 72978 AGTGATAGAACTCCGTATGTTTGTCAGTCTCAATCAGTCAATCTGTTCTTGCCTGCCAAC 73037
Query 15799 GTAAACATTAAAG--AGTTACATGACATACACATGTTAGCTTGGAAAAGAAAAATTAAAA 15856
|| ||| || | | || ||| | ||||||||| | || ||||||| | | | || |
Sbjct 73038 ATACACA--AACGTTACTTGCATAAAATACACATGCTTGCCTGGAAAAAAGGATTGAAGA 73095
Query 15857 CTTTGTATTATTGTAGA 15873
|| ||||| || |||
Sbjct 73096 GCTTATATTACTGCAGA 73112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134259228291472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |