Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020483.1 Length=42084 Score E Sequences producing significant alignments: (Bits) Value seq4984 84.2 6e-12 >seq4984 Length=100180 Score = 84.2 bits (92), Expect = 6e-12 Identities = 249/377 (66%), Gaps = 8/377 (2%) Strand=Plus/Plus Query 15501 AATAGAACCATACAGAGCTAACGCTTATGTACAAAAAACAATGTCAGGTTCTTTTCTAGT 15560 |||||||||||| ||| |||| | ||||||| ||| || |||| || ||| |||| Sbjct 72740 AATAGAACCATATGCAGCAAACGTATTCATACAAAAGACACTGACAGGCTCATTTGTAGT 72799 Query 15561 TAAGAATAAATATTTAGAAAAGTTACTAG-AGAAAAAAGGCATGAACACTGACGCAGTGT 15619 ||||||| || |||| | ||| |||||||| || || || ||| | | | Sbjct 72800 GCGAAATAAATTCTTGCAAAAACTGTTAGCAGAAAAAAATCAAGA-CAATGATAAAATAT 72858 Query 15620 GGCAATCTATTGTAGCACA-GAGAGGTTCTGTATTACATTTAGATGAACTATCTGATTAT 15678 || || ||| || | ||| ||||| || ||||||||| || ||| || Sbjct 72859 GGTCTTCAATTTCGACAAACGAG-GGTTCCGTTCAGCATTTAGATTTTCTTAGTGAGCAT 72917 Query 15679 GAAAAAGATACATTTAAAACATCTATAGAAATTAATCAGCAATGGATAATAGAACATGCG 15738 |||||| |||||||||||| | || || |||| |||||| ||||||||||| Sbjct 72918 GAAAAATTGACATTTAAAACAGCGTACGAGCTTGATCAAAGATGGATTATAGAACATGCA 72977 Query 15739 GCAGACAGACAACAATTTATATGTCAAGGTCAGTCAGTAAATGTATTTGTACCTGCTGAT 15798 || ||| | | | | ||||| ||| ||||| ||| | || | ||||| | Sbjct 72978 AGTGATAGAACTCCGTATGTTTGTCAGTCTCAATCAGTCAATCTGTTCTTGCCTGCCAAC 73037 Query 15799 GTAAACATTAAAG--AGTTACATGACATACACATGTTAGCTTGGAAAAGAAAAATTAAAA 15856 || ||| || | | || ||| | ||||||||| | || ||||||| | | | || | Sbjct 73038 ATACACA--AACGTTACTTGCATAAAATACACATGCTTGCCTGGAAAAAAGGATTGAAGA 73095 Query 15857 CTTTGTATTATTGTAGA 15873 || ||||| || ||| Sbjct 73096 GCTTATATTACTGCAGA 73112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134259228291472