Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq8748 109 3e-19 >seq8748 Length=68017 Score = 109 bits (120), Expect = 3e-19 Identities = 115/149 (77%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973 |||| | |||||| | ||| |||| ||| |||||||| | ||||||||| || || | Sbjct 34072 CATTCTTTTCAACTCGTTTCATGAATAGATCAGGAATCCATAATGCATAAAACAAGTCCC 34131 Query 25974 TCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCT 26032 |||| ||| ||||| || ||| |||||||| ||||| | ||| |||||||||||| Sbjct 34132 GAGCTCGTTGTTCCTCTTTCCCTGTG-TTCTTTTTGAGATCCAGGAAGTCAAAAATATCT 34190 Query 26033 GAGTGCCATGGTTCTAAATAGATAGCAAA 26061 || ||||| || || ||||| |||||||| Sbjct 34191 GAATGCCACGGCTCCAAATAAATAGCAAA 34219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252484165693700