Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq114 224 1e-53 seq70102 152 6e-32 >seq114 Length=395947 Score = 224 bits (248), Expect = 1e-53 Identities = 365/524 (70%), Gaps = 10/524 (2%) Strand=Plus/Minus Query 138179 TGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTT 138238 ||| ||||| |||||||| | |||||||| ||||| ||||||||||||||||| || || Sbjct 175872 TGCCACACCGATAGGACCCATACCAGGACCACCACCACCATGTGGAATACAGAAGGTTTT 175813 Query 138239 ATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTG 138298 ||||| || | ||||| || ||||| ||| | || ||| | | | || ||||| Sbjct 175812 GTGTAAGTTCAAGTGACAAACGTCTGCGCCAATATAACCTGGGCTGGTCAATCCAACCTG 175753 Query 138299 TGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACA 138358 ||||| | || |||||||| | ||| |||||||||||||| ||||| | ||| ||||| Sbjct 175752 CGCATTCATGTTCGCACCATCCATATACACCTGACCACCATTTTCATGGATGATATTACA 175693 Query 138359 TATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACA 138418 |||| | || |||||||||||| || || |||||||| || | ||| | || Sbjct 175692 GATCTCTACAATCGGCTCTTCAAATACACCGTGGGTAGATGGATAAGTCACCATTA-AC- 175635 Query 138419 TGAGAGTTCAAAT-----GTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATG 138473 |||||||| | | || | ||||||| || || |||| | || ||| Sbjct 175634 ---GAGTTCAACTTAGCAGCATGCTCTGTTGCTTTTGCCTTAAGGTCTTCCACATCAATG 175578 Query 138474 TTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCA 138533 || ||| |||||||| || || | || ||||||| ||| ||||| ||| ||| Sbjct 175577 TTTCCACGTTCATCACATTTTACCACAACCACTTTCAATCCGGCCATAGAAGCAGATGCA 175518 Query 138534 GGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGAT 138593 || || || || ||||| || | || |||| ||| | || ||| | | |||||| Sbjct 175517 GGGTTGGTACCGTGTGCCGAAGCAGGGATCAAACAGATATCTCTATCAAAATCTCCACGG 175458 Query 138594 CCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTA 138653 | || || || || ||||| | | | ||| ||||| ||||| |||| || | ||| Sbjct 175457 CTATGGTGGTAAGCACGGATTACCATTAATCCAGCATATTCACCTTGTGCACCAGAGTTT 175398 Query 138654 GGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAACCA 138697 ||||| || || || |||| || ||||| ||||||||||| Sbjct 175397 GGTTGGAAGGACATTTTTGCAAATCCGGTGATCTCACATAACCA 175354 >seq70102 Length=5097 Score = 152 bits (168), Expect = 6e-32 Identities = 432/654 (66%), Gaps = 20/654 (3%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||||| ||||| || || || ||||| ||||| || ||||||||||||||||| || ||| Sbjct 3854 ACACCGATAGGGCCAACACCTGGACCACCACCACCGTGTGGAATACAGAATGTTTTGTGT 3795 Query 138243 AAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 | || || || |||| || | ||| || | || || ||| | ||||||||| || Sbjct 3794 AGGTTAAGGTGCGATACGTCAGAACCGATTG-AACCAGGGCTTGTAACACCTACCTGCGC 3736 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATAT 138361 || | ||||| || || | || || ||||| || | | || ||||| | ||| || Sbjct 3735 GTTCATGTTTGCGCCGTCCATGTACACTTGACCGCCGTGCTGGTGCACGATGTCACAGAT 3676 Query 138362 CTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 | | || || ||| | ||||| || || ||||| || || ||||| ||||| || Sbjct 3675 TTCACGAATTGTTTCTTCGTAAACACCGTGTGTAGATGGGTAAGTGATCATGATACAAGA 3616 Query 138422 GAG---TTCAAAT--GTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTG 138476 || |||| || | ||| |||||| | || ||| || || | ||| Sbjct 3615 TAGGTTTTCAGATACCTCTTC-----GGCTTTCGCTTTAAGGTCTGCCATATCAACGTTA 3561 Query 138477 CCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 || | | |||||| | ||| | || | |||||| | |||||| |||| || || Sbjct 3560 CCGTTTTTATCACAGTCAACAACCACGATTTTCATGCTTGCCATTTGTGCAGACGCTGGG 3501 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTA---TCATCTCCTGAT 138593 || || || || ||||| ||| |||| |||||| || | | | ||| | | ||| Sbjct 3500 TTTGTACCGTGCGCTGAACTTGGGATCAAACATACGTTACGGTGACCTTCACCGCGTGA- 3442 Query 138594 CCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTA 138653 || | || ||| | || || | | ||||| || ||||| |||| |||| |||| Sbjct 3441 -CTCG-TGGTATTTACGAATCGCGATTAAGCCTGCGTATTCACCTTGTGCACCTGAGTTA 3384 Query 138654 GGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAGTCATCT 138713 ||||||| ||| | | ||| |||||||||| | |||||| | ||||| || Sbjct 3383 GGTTGTAGTGAAACTGCATCGTAACCTGTGATGTTTACTAACCAGTCATGTAACTCTGTC 3324 Query 138714 ATTATCTTTTGATAACCCATGGTCTGTATCATAGGTGTA-TGTGGATGCACGTTGGCAAA 138772 || || |||| |||||| | ||| |||| | | | ||| || | ||| ||||| Sbjct 3323 ATCATGATTTGGTAACCCGCTGCCTG-ATCAAGTGGGCAGAATGGGTGTAAGTTTGCAAA 3265 Query 138773 TTCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCA 138826 || ||| | | || |||| || |||| ||||| || |||||||| || Sbjct 3264 CTCAGGCCAAGTGATTGGGATCATCTCAGCTGTCGCATTAAGCTTCATTGTACA 3211 Score = 84.2 bits (92), Expect = 3e-11 Identities = 171/254 (67%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 || || | || ||| || || | || ||||| | | ||| || || || | | |||| Sbjct 2744 AGGCCCTGTGGACCGTGGTAAACCGCGTAGAACGCTGCCATGTTCGCTAGTAATACTTGC 2685 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 ||||| |||||||| | | ||||| || | | |||||| || || | ||||| | | Sbjct 2684 GCTGTACAGATGTTTGAGTTGGCTTTTTCACGACGAATATGTTGTTCACGTGTTTGCATT 2625 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || | | |||| || ||| || ||| || ||| | ||| | || ||| Sbjct 2624 GCCATACGTAATGCGTCGTTACCTAAGCGGTCTTTAGAAACACCGATAATACGACCTGGT 2565 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 | | ||| |||||||| |||||| ||||||||||| || ||||| ||||| ||| Sbjct 2564 AGTGAACGCTTGTACTTGTCGCGTGTTGCGAAGAATGCAGCGTGTGGACCACCGTAACCC 2505 Query 139500 ATAGGAATACCAAA 139513 ||||| | |||||| Sbjct 2504 ATAGGTACACCAAA 2491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577693945554720