Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq5 257 2e-63 seq1499 181 1e-40 seq4656 89.7 7e-13 >seq5 Length=869209 Score = 257 bits (284), Expect = 2e-63 Identities = 534/785 (68%), Gaps = 49/785 (6%) Strand=Plus/Minus Query 47760 AACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTCTTC 47819 || ||| | ||| || ||||| || || || || |||||||| || || |||| || Sbjct 385510 AATAAATTCACGTACCGAATACTGGACGCCAGTCGCGATAACAAAGTCTTCTGGTTGATC 385451 Query 47820 TTGTTGAAGCATTAACCACATAGCCTC--GACATAATCTCTGGCATGTCCCCAGTCACGA 47877 ||| || | ||| | |||| || | |||||||||| ||||||| ||||| ||||| Sbjct 385450 TTGCTGTAACATCATCCACT--GCATGCGGACATAATCTTTGGCATGCCCCCAATCACGT 385393 Query 47878 AGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTA---CCTTCAG--AGATT-GCT 47931 | ||||| | ||| || | | ||||||| | ||| | |||| | | ||| ||| Sbjct 385392 AAGGCATCCATATTGCCCATAAATAAACA---TGGCTCAAGACCTTGGGCAATATTCGCT 385336 Query 47932 TTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGA 47991 || | | ||||| ||||| |||||||| ||||||||||| | ||| |||||| Sbjct 385335 ---AAACCGCGGGTAATTTTACGTGTTACAAAGGTTTCACCACGGCGCGGACTTTCATGG 385279 Query 47992 TTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTT--CTTTACTA 48049 ||||| | |||||| ||||||||||||| || || | ||| || ||||| | || | Sbjct 385278 TTAAATAAAATACCGTTACAGGCATACATACCATAAGCTTCGCGGTAGTTTACGGTA--A 385221 Query 48050 TCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCT 48109 ||||||| |||| | ||| || || ||||||| || ||||| || || || ||||| | Sbjct 385220 TCCAGTAAGCATACATTTTAGCTACGGCATAAGGTGACCGTGGGTAAAACGGCGTGGTTT 385161 Query 48110 CTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATAC 48169 || |||||||| |||| ||||| |||||| || ||| || || || ||||| | || Sbjct 385160 CTTTCTGTGGAATCTCCTGCACTAAACCATACAGCTCAGAAGTTGACGCCTGATAAAAAC 385101 Query 48170 GAACCCTATCTTCCATCTCAAGC----AAACGGACTGCCTCAAGCACTCTCAGGGTGCCT 48225 | | ||||| ||| || | | ||| | || || || | | ||| || || Sbjct 385100 G--GGTTTTCTTC--TCTAAACCTAAAATACGAATCGCTTCTAGAATCCGCAGCGTACCA 385045 Query 48226 ATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGT 48285 || ||||| | | | ||||| || || ||||| ||| |||||| || ||| Sbjct 385044 ATAGCATCAACATCAGCCGTATATTCTGGTGCTTCAAAACTTACCGCTACATGGCTTTGT 384985 Query 48286 GCCCCAAGATTATAAATCTCATCTGGTTGAACCTGCTGAATAACCCTCACTAAATTTGTA 48345 || || | |||||||| ||||| || || ||||||||||||| || ||| ||||| | Sbjct 384984 GCACCTAAGTTATAAATTTCATCCGGCTGCACCTGCTGAATAATCCGCACCAAATTAGAG 384925 Query 48346 GAGTCTGTTAAGTCTCCATAATG--CAAT---------TTTA-----AT-----TGATCA 48384 | || ||||| || |||||||| ||| ||| || | ||| Sbjct 384924 GTATCGGTTAAATCACCATAATGGAGAATAAAGTGCTGGTTATCGACATGCGGATCTTCA 384865 Query 48385 TAAATGTGATCAATTCTATGTGTATTAATTAAAGAAGCCCGACGGACAATACCATGAACC 48444 ||||| ||||| | | || || |||| ||| || ||||| |||||| || ||| Sbjct 384864 TAAATATGATCGACACGTTGCGTGTTAAAGCTAGAGGCACGACGCTTAATACCGTGTACC 384805 Query 48445 TCATACCCCTTTTCAAGAAGAAGTTCTGCTAAGTATGAACCATCTTGTCCTGTAATACCA 48504 ||||| || ||||| | | || || |||||||| || || || || || || | ||| Sbjct 384804 TCATAACCTTTTTCCAATAAAAACTCGGCTAAGTAAGAGCCGTCCTGGCCGGTTACACCG 384745 Query 48505 GTGAT 48509 || || Sbjct 384744 GTAAT 384740 Score = 109 bits (120), Expect = 7e-19 Identities = 235/345 (68%), Gaps = 15/345 (4%) Strand=Plus/Minus Query 64041 CATTCTACGATTGGCAATCCATTCCACATACTGCTGAAGCAACTTATCATTG---AGACC 64097 ||||| | ||||| ||| | || |||||||| || | |||| ||| || || Sbjct 713449 CATTCGGCTATTGGTAATATACTCAACATACTGACACAGAA---TATCTTTGTTCAGGCC 713393 Query 64098 AATCATCGAACCATCCTTGAACAGATACTCTGCCCAAAGTTTTTCTTGATTTACAGTTTT 64157 ||||||||| ||||| || |||||||| ||||||| |||||||| | | | Sbjct 713392 AATCATCGAGCCATCTTTAAACAGATAGGCTGCCCAGTCCTTTTCTTGCTCCGCCGCG-- 713335 Query 64158 CTCAAAAGTATTGATTAACCACTGCTCTTCT---TCTTTGAAGATTTGTGCCATCTCAGG 64214 | || || || | ||| | | |||||| |||||| |||| ||||| || || Sbjct 713334 CGCATAAAGATGGCGTAAG-ATTCCTCTTCGCACTCTTTGGCAATTTCCGCCATTTCCGG 713276 Query 64215 ATCATCACCTTCTCT--CCACT-TCTTCAGAATATTCTGAGTAATGGCAAGGTGTTGATT 64271 ||||||| | | || ||| | ||||| |||| |||||| || |||||| | Sbjct 713275 ATCATCATCACCGCTGGCCAGAATATTCAGCATATGCTGAGTGCCGGTGAGGTGTAGCGC 713216 Query 64272 CTCATCTCTGGCAATCAGTGAGATGATCTTTGCACTTCCTTCCATAAGTTTGAGTTCGCC 64331 ||||| | ||||||||| ||| ||||| ||| | |||||||| || | | || | Sbjct 713215 TTCATCGCGGGCAATCAGCCGGATAATCTTAGCATTCCCTTCCATCAGCTCACGCTCAGC 713156 Query 64332 AAAAGCAAAACTGCAAGCAAATGATACGTAAAATCGAATACCTTC 64376 ||||||||||||||| ||||| || ||||| || || |||| Sbjct 713155 AAAAGCAAAACTGCAGGCAAAGCTGACATAAAAGCGGATCGCTTC 713111 >seq1499 Length=182485 Score = 181 bits (200), Expect = 1e-40 Identities = 396/588 (67%), Gaps = 14/588 (2%) Strand=Plus/Minus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || || ||||| ||||| || || | ||| || ||||| || | ||||||||| || Sbjct 182137 CCAGTAGCAATGACAAAGTCTTCGGCAATTTCCTGCTGAAGGATAAGCCACATAGCTTCC 182078 Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907 ||||||||| | ||||||||||| || || | ||| ||| ||||| || |||| Sbjct 182077 ACATAATCTTTCGCATGTCCCCAATCGCGTTGCGCAGAAAGGTTTCCAAGGAATAATTTA 182018 Query 47908 TCTTGCTTACCTTCAGAGATTGCTTTTAA--TGCTCTTGTAATCTTACGAGTTACAAAAG 47965 || || ||| | ||| ||| | ||||||||| || || || || ||||| | Sbjct 182017 TCCTGTAAGCCTAAAACGAT--CTTCGCAGCTGCTCTTGTGATTTTTCGGGTCACAAAGG 181960 Query 47966 TTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGT 48025 |||| |||||| || |||||| || || | |||||| |||| |||||||| | Sbjct 181959 TTTCCCCACGTACAGGGCTTTCATGGTTGAATAATATACCATTACAAGCATACATGTTAT 181900 Query 48026 ATGATTCACGATAGTT--CTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGG 48083 | | || |||||||| | || |||||||| ||||| ||||| || || ||||||| Sbjct 181899 AAGCCTCGCGATAGTTGACCGTA--ATCCAGTAGCCATATAGTTTGGCTACCGCATAAGG 181842 Query 48084 AGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAG 48143 ||| |||||||| || || ||||| |||| || | ||||||| ||||| || Sbjct 181841 GCTACGCGGATAGAATGGCGTTGTCTCACTCTGCGGCACTTGTTGCACCAAGCCATATAG 181782 Query 48144 TTCACTGGTGGATGCTTGATAGATACGAACCCTATCTT---CCATCTCAAGCAAACGGAC 48200 ||| || |||||||||||||| || | || || ||| | | ||||| || Sbjct 181781 CTCAGAAGTAGATGCTTGATAGATCCG---GCAATGTTCAACCAGTCCTAATAAACGAAC 181725 Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260 ||||| | | | ||||| || | | |||| | | | | ||||| || || | || Sbjct 181724 CGCCTCTAAAATCCGAAGGGTCCCCAAGCCATCAGCGTTAGCTGTATATTCTGGGGTGTC 181665 Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTG 48320 || |||||| ||||| ||||| | || ||||| ||||| | |||| | Sbjct 181664 GAAACTAACCTTAACATGCGATTGTGCGGCCAGGTTATAGATCTCGTGTGGTCTGGTTTC 181605 Query 48321 CTGAATAACCCTCACTAAATTTGTAGAGTCTGTTAAGTCTCCATAATG 48368 ||||||| | | | || ||||| || |||| || |||||||| Sbjct 181604 TTGAATAATGCGGATCAGGTTGGTAGAATCGGTTAGATCGCCATAATG 181557 >seq4656 Length=104629 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 53741 TGGAGAATAACGGACTCGAACCGTTGACATCCTACTTGCAAAGCAGGCGCTCTA-CCAAC 53799 |||||||||||||| ||||||||||||| ||| | ||||| ||||| |||||| ||| | Sbjct 93594 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 93653 Query 53800 TGAGCTAATTCCCC 53813 |||||||||||||| Sbjct 93654 TGAGCTAATTCCCC 93667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 663995074391520