Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq57698 123 3e-23 seq68 102 1e-16 seq8748 82.4 9e-11 >seq57698 Length=6283 Score = 123 bits (136), Expect = 3e-23 Identities = 263/384 (68%), Gaps = 29/384 (8%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 |||||||| || || || | | || ||| || || |||||| | || || || ||| Sbjct 4703 CCAGGTACAGGTAAAACATTATTAGCAAAAGCAATTGCTGGTGAAGCTAAAGTACCTTTC 4762 Query 175375 ATCCAGTG-CTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433 || ||| ||||| | ||||||| || ||||| |||||||| ||||| | || Sbjct 4763 TTC-AGTATCTCTGGTTCTGACTTTGTCGAAATGTTCGTTGGTGTAGGTGCATCGCGTGT 4821 Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAA-TCAA---CCATGTATTGTCTTCATTGATG 175489 ||| ||| | |||||| | |||||| ||| || ||||| |||| ||||||| Sbjct 4822 TCGTGATATGTTTGAA----CAAGCGAAACGTCATGCGCCTTGTATCATCTTTATTGATG 4877 Query 175490 AGATTGATGCGGTGGGCAAGCAACG-----CAGCG-CTGGTGGTATGCCAGCAAATGACG 175543 |||||||||| || || || || ||| |||||||| | |||| | Sbjct 4878 AGATTGATGCTGTTGGTCGTCATCGTGGTTCAGGTACTGGTGGTGGTC------ATGATG 4931 Query 175544 AGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGA---CAATGAGA 175600 || | || ||||| | || ||| | || ||||||||||| ||||| |||||| Sbjct 4932 AGCGTGAGCAAACCTTAAACCAAATGCTTGTTGAGATGGATGGTTTTGAAGGCAATGAA- 4990 Query 175601 CTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTC 175660 ||| || | |||||||| || ||||| ||||| ||| | |||||| | || | |||| Sbjct 4991 --GGCGTTATCGTTATTGCTGCGACTAACCGCGTAGATGTTCTTGATAAAGCATTACTTC 5048 Query 175661 GCCCGGGTCGTTTTGATCG-CAAG 175683 | || ||||||||||| || |||| Sbjct 5049 GTCCAGGTCGTTTTGACCGTCAAG 5072 >seq68 Length=444459 Score = 102 bits (112), Expect = 1e-16 Identities = 339/517 (66%), Gaps = 18/517 (3%) Strand=Plus/Minus Query 175185 CTTCAGTGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTT 175244 |||| ||| || | || || |||| ||||| || || || |||||||| || || || Sbjct 25416 CTTCGATGACGTGGCCGGCATCGACGAGGCCAAGGAAGAGCTGGAAGAGATCGTCGAATT 25357 Query 175245 TCTCAAGCAACCCGAGAGATATTTTGGAAGT---GGTGCCAAGATCCCCCGAGGCGCCCT 175301 || |||||||| ||| |||| | || || | |||||||||| ||| || || Sbjct 25356 CCTGC-GCAACCCGC-AGAAGTTTTCGC-GTCTCGGCGGCAAGATCCCCAAAGGTGCGCT 25300 Query 175302 TCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATC 175361 || | ||| || || ||||| || ||||| ||||| || |||||||||||||| | Sbjct 25299 GCTGGTCGGTCCCCCCGGCACGGGTAAAACCCTGCTCGCGCGCGCCATCGCGGGTGAGGC 25240 Query 175362 AAATGTCCCATTCATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGG 175421 || || ||| || ||| | | |||| ||||| ||||| ||||| || || Sbjct 25239 GGGCGTGCCGTTCTTCACCATCTCGGGTTCCGACTTCGTGGAAATGTTCGTTGGGGTCGG 25180 Query 175422 TGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTT 175481 ||| | || ||||| | || ||| ||| | ||| || || || || || Sbjct 25179 TGCATCCCGTGTGCGCGACATGTTCGAACAGGCCAAGAAGAATGCGCCTTGCATCGTGTT 25120 Query 175482 CATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTAT-GCCAGC--AAA 175538 || || ||||| || || |||||| ||| ||| || ||||| | | || || Sbjct 25119 TATCGACGAGATCGACGCCGTGGGCCGTGCGCGCGGCG-TG--GGTATCGGCGGCGGCAA 25063 Query 175539 TGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGA---CAA 175595 |||||| | ||||| ||| | || || || || ||||||||| || || || || Sbjct 25062 TGACGAACGCGAACAGACACTGAACCAGCTTCTGGTCGAGATGGACGGGTTCGAGGCAAA 25003 Query 175596 TGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCT 175655 ||| || || | | | ||||| || || || |||| | || || || || Sbjct 25002 TGAAGGTGTGATCATCG---TCGCGGCGACCAACCGTAAGGATGTGCTGGACCCGGCGCT 24946 Query 175656 CCTTCGCCCGGGTCGTTTTGATCGCAAGATCCAAGTG 175692 || ||||| || || || || ||| ||||||| ||| Sbjct 24945 GCTGCGCCCCGGCCGCTTCGACCGCCAGATCCATGTG 24909 >seq8748 Length=68017 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934 |||||| |||||| | |||| || || || |||||||| || ||| | |||||| Sbjct 33130 GTTTGGTTTGCTATTATTGAATCGCAAGTTGAAACCGGAACACCTTACATGTTATACAAG 33071 Query 75935 GATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTT 75994 ||||||||||| | ||| || |||||||||||||||||||| || | ||| | Sbjct 33070 GATGCTTGTAATAGGAAATCAAATCAAAAGAATTTGGGAACAATTCAGTGTAGCAATTTG 33011 Query 75995 TGCACGGAAATTTTAGAGTACAC 76017 || || |||||| | || || || Sbjct 33010 TGTACAGAAATTGTTGAATATAC 32988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595225558519680