Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq379 699 0.0 seq68 289 1e-73 >seq379 Length=288837 Score = 699 bits (774), Expect = 0.0 Identities = 1201/1729 (69%), Gaps = 52/1729 (3%) Strand=Plus/Plus Query 50702 ACGCTCAGGACGCTGCCAGTGACCGCGTTGGGGCGGTATGTGGTGCATCCCTTACAACCG 50761 ||| |||| || ||| || ||||| || ||||| || |||||||| ||||| || || Sbjct 225840 ACGGTCAGAACCGAGCCGGTCACCGCATTCGGGCGATAGGTGGTGCAGCCCTTGCAGCCC 225899 Query 50762 GACTCCCAAGCCATCATGTAGACATCCTTGAAGTCCTCAAAGCTGATGTCTTCGGGCAGG 50821 ||||| || ||||||||| |||||||| || ||||||||||| || ||||| | Sbjct 225900 TGATCCCAGGCGGCCATGTAGACCTCCTTGAAATCGTCAAAGCTGATATCCTCGGGGCAG 225959 Query 50822 TTGATCGTCTTTGAGATCGAACTGTCAATCCACCGCTGGGCCGCAGCCTGCATGACAATG 50881 ||||| || || |||||||| ||| ||||| ||| || || ||||||||| | Sbjct 225960 TTGATGGTTTTCGAGATCGACGAGTCGATCCATTTCTGCGCGGCGGCCTGCATGCGCACA 226019 Query 50882 TGAGCCTCGGGGGTGAGGGTCTGGGCGTTGACGAACTGCGGTGGCAGGTTGTTCACATCG 50941 ||| || || | |||||||| || ||||| || | |||||| | ||||| Sbjct 226020 TGATCCAGCGGCGGCAGGGTCTGCGCATTGACAAAATAATCCGGCAGGGC---CGCATCG 226076 Query 50942 GGTGTGGGCTTCCCGTTGTCGGCGCAGAAGGCGATGTATTGCTGAAGGGAATAGCTGTCC 51001 |||| | | || | ||| | | || || || | || | | Sbjct 226077 CC------CTTCAGATCG-CGCCACAGC------TTCACCGCGTAATCGACCACCTCTTC 226123 Query 51002 ACCCGCTCAGGCCGCTTGGTGCCGTCCTTTTCCAGAACCTTGCGGGTGTAGCTGTTCGCA 51061 ||| | ||| | |||||| || | || |||||||| ||||| | ||| Sbjct 226124 -----CTCGGTGCGC---GAGCCGTCTTTCTGCAAGACCTTGCGCTTGTAGGCATAGGCA 226175 Query 51062 AAGACTGGTTCGATGCCGGATGACACGTTCCCGGCGTAGAGGCTGATGGTGCCGGTCGGC 51121 ||||| || ||||| || || || || || || || || || |||||||||||| ||| Sbjct 226176 AAGACCGGCTCGATCCCCGACGAGACATTGCCCGCATAAAGCGAGATGGTGCCGGTGGGC 226235 Query 51122 GCGATAGAGGTCAGCAGGGCGTTCCGAATACCATGTTCACGGATGGCGTCACGCACATCT 51181 ||||| || |||||||||||||| ||||| ||||| ||||| ||||| |||||||| Sbjct 226236 GCGATGGACGTCAGCAGGGCGTTGCGAATGCCATGCGTGCGGATCGCGTCGCGCACATCC 226295 Query 51182 TGATCCATGCTCATCATGTTCTCACCGGCCAGATACTTGTCAGCATCAAACAGCGGGAAC 51241 | |||||| ||||||||| | ||| || || || ||||| ||||| ||||| Sbjct 226296 TCATCCATCTGCATCATGTTGCCGGAGGCGAGGTAACCCTCGGCATCGAACAGAGGGAAA 226355 Query 51242 GCACCCTTCTCTTTGGCGAGATCCACGGACCCAAGATAAGCCGAACGGGCAATCTGGTGC 51301 | ||||||||||| || ||||| || || | || || | | ||||| ||| | | Sbjct 226356 GGCCCCTTCTCTTTCGCCAGATCGACCGAGGCGAGGTAGGAGGCGCGGGCGATCGCCTTC 226415 Query 51302 ATGATGTCATCGGTCATGCTGGCCGCGTCATCGGTGC---CATAGGTCAGGCCCAACATG 51358 || | | |||||| ||| || ||| | ||||||| ||||| |||||||| ||| Sbjct 226416 ATCCAGGCTTCGGTC-TGC--GCGGCGGCCTCGGTGCTGCCATAGCGCAGGCCCAGCATC 226472 Query 51359 ATCAGCGCATCGGCCAGACCGGTGACACCCAGACCAAGGCGGCGTTTGTCGTGAGCCTCT 51418 | || ||||| || || ||||| || ||||| || | |||||| |||| | | ||||| Sbjct 226473 AGCAAGGCATCCGCGAGGCCGGTCACGCCCAGCCCGATGCGGCGCTTGTTGCGCGCCTCA 226532 Query 51419 TTGTCTTGGGCGGGCAGTGGGAACTTGGACGTGTCCACCACATTGTCCATCATGCGGATG 51478 | || ||| ||||| | | |||||||||||||||||||| || | Sbjct 226533 AGCGCCTGCTGTTCCAGCGGGAAGCGGCTGGCATCCACCACATTGTCCATCATCCGCACC 226592 Query 51479 GCGGTGCGGACCAGCTTGTCCAGCGCCTTCAGGTCGATGGTAGCGGCTTCGG--TGAAGG 51536 | ||||||||| | ||||||||| | | || | | || ||||| |||| | Sbjct 226593 GAAAGGCGGACCAGTTCGTCCAGCGCGACCGGATCAAGCTTTGCT--TTCGGCGTGAAAG 226650 Query 51537 CATACTTGACCATGCGGGCCATG-TTGATCGAACCCAGAAGACAGGCACCGTAGGGTGGC 51595 | | |||| ||| || | |||| ||| ||||| || ||||| || ||||| ||| Sbjct 226651 GGTCTGTCACCA-GCGTCGCAAGATTGACCGACCCCAGCAGGCAGGCGCCATAGGGCGGC 226709 Query 51596 AGGGGTTGTTCGCCGCAGGGGTTTGTGGCCGCGATGACCTCGCAATAGTTCAGGTTGTTC 51655 || || ||||| || |||||||| ||||| |||||| || ||| ||| |||||| Sbjct 226710 AGCGGCTGTTCCCCACAGGGGTTGGTGGCGGCGATGGTTTCCACATAACCCAGATTGTTC 226769 Query 51656 CGGTTATTGATCCGGTCGATGAACAGGACACCCGGCTCAGCAACATCATAGGTGTGCTTC 51715 || ||||| ||||||||||| | ||||| || || || | |||||| |||| | Sbjct 226770 ATCTTGTTGATGCGGTCGATGAAGATCACACCGGGTTCCGCGAAATCATAAGTGTTGCGC 226829 Query 51716 ATCATGGCGTCCCACAATTCAGTGGCGCG---GACTCGGCT-ATACACCTTACCCTCAAA 51771 || || || ||||| || ||||| || || | ||| ||||| || || || Sbjct 226830 ATGATCTTGTTCCACAGATC----GCGCGCCTGAACCGTGTGATAGACCTTGCCGTCGAA 226885 Query 51772 CACCAGATCCCACATCTCATCGGCCTCTTTGGCCTTCATGAAAGCGTCGGTGATCAAGAC 51831 ||| |||||| |||| |||| ||| | |||||| || ||||||| || || Sbjct 226886 TTGCAGCTCCCACGGGCCATCAGCCTTCACGGCATCCATGAAGGCATCGGTGACCAGAAC 226945 Query 51832 GGACATGTTGAACATCCGCAGCCGGTTCGGATCCGACTTGGCCGTGATGAAGTCTTTGAT 51891 |||| ||||||||| ||||| ||| ||| || ||||||| ||||||| | | | Sbjct 226946 CGACAGGTTGAACATACGCAGGCGGGCCGGGTCTTTCTTGGCCTCGATGAAGGCCTCCAC 227005 Query 51892 GTCGGGGTGATCGCAACGCATTGTTGCCATCATCGCGCCACGGCGGGACCCGGCAGACAT 51951 || ||||| ||||| ||||| || |||||||||||||| ||||| || ||||||||||| Sbjct 227006 ATCCGGGTGGTCGCAGCGCATGGTGGCCATCATCGCGCCCCGGCGCGAACCGGCAGACAT 227065 Query 51952 GATCGTGCGACACATCGCATCCCAGACATCCATGAAAGACAGGGGACCAGAAGCATCCGC 52011 ||| ||||| |||||||||||||||||||||||||| ||| || || || ||||| || Sbjct 227066 GATGGTGCGGCACATCGCATCCCAGACATCCATGAAGCTCAGCGGGCCGGAGGCATCGGC 227125 Query 52012 AGCAACACCTTTGACGATTGCACCCTTGGGGCGGATGGTGCTGAAGTCATAGCCGATGCC 52071 || || || || || || || ||||||||||| ||| ||||||||||| || Sbjct 227126 GGCGACGCCCTTCACCTCGGCCCCGCGCGGGCGGATGGTCGAGAAATCATAGCCGATCCC 227185 Query 52072 GCCGCCCTGTTGCATGGTCAGCGCAGCTTCCTTCAGCATGTCGAAGATGCCGCCCATGTC 52131 ||||||||| |||||||||||||| |||||||||||| ||||| ||||| |||| Sbjct 227186 GCCGCCCTGCTGCATGGTCAGCGCGGCTTCCTTCAGCGCATCGAAAATGCCCGACATGCT 227245 Query 52132 GTCTGGCACGGTCCCCATGACAAAGCAGTTGAAGAGGGTGACATTTCGTCCAGTCCCGGC 52191 ||| |||||||| |||||||||||||||||||| || || || | || || || || || Sbjct 227246 GTCCGGCACGGTGCCCATGACAAAGCAGTTGAACAGCGTCACGCTGCGCCCGGTGCCCGC 227305 Query 52192 CCCGGCGGTGATCCGGCCAGCGGGCAGATACTTAAAATCTTCAAGGGCGTTGTAGAAGTC 52251 |||||||| ||||| || |||||||| || || || |||| || ||| ||||| Sbjct 227306 ACCGGCGGTAATCCGCCCGGCGGGCAGGTATTTGAAGCCTTCCAGTGCGGAATAGAATCG 227365 Query 52252 TTCTTCGCACTGGGGACGGATGTTGTCACCCTCACAAGCGGCAAG-GTCCGTGGCAATTC 52310 ||||| ||| | | || || || ||| |||| || | ||| || || | Sbjct 227366 CTCTTCCCACAGCGCCGGGTCTTTTTCCACCT------CGGCCAGCGACCG-CGCGATGC 227418 Query 52311 GCAACCATGTGTCTTCCACATCTTGGTCAATCGGGGTGCCGTCTTGCTGTTTGAAGCGAT 52370 | ||| || || || || || | ||| ||||| || |||||| | || | Sbjct 227419 GGCGCCAGGTATCCTCGACCGAAGCATCCACCGGCGTGCCATCCGCCTGTTTCAGCCGGT 227478 Query 52371 ACTTACTATCCCAAATCTGGGCGGCAATGGGTGCGCTGAAGCGAGTCAT 52419 | || | ||||| ||||| ||||||||||||| ||| |||| ||| Sbjct 227479 ATTTCATGTCCCAGATCTGCTCGGCAATGGGTGCTGCGAATCGAGACAT 227527 >seq68 Length=444459 Score = 289 bits (320), Expect = 1e-73 Identities = 434/613 (71%), Gaps = 9/613 (1%) Strand=Plus/Minus Query 44401 GGCTATCGCATCGGCATAGACACGGACCTCTTTCTGGGCATGTTCATCGGCCCGCAGGCG 44460 ||| || || |||||||||||||||| || | || ||||| ||||| ||||| || Sbjct 66434 GGCGATGGCCTCGGCATAGACACGGATTTCGTATTGCGCATGCGGGTCGGCACGCAGCCG 66375 Query 44461 CAGGAAGTGGAAGAGGTTGTGTAGGTCAATCTTCCAATACCATTGGGTGTAGACATTGAC 44520 |||||||||||| |||||||| || || | |||||||||||||| || |||| |||| | Sbjct 66374 CAGGAAGTGGAACAGGTTGTGCAGATCGGTTTTCCAATACCATTGCGTATAGATATTGGC 66315 Query 44521 CGGCAAGTTCATGCGGGCCAGTTCGCGGGCCAAGCCGTCCTGACCGTCATCGCTGATCAT 44580 |||| |||||| || ||||| || || || | ||| | ||| || || | ||||| ||| Sbjct 66314 GGGCAGGTTCATCCGTGCCAGCTCACGCGCGAGGCCCTGCTGGCCATCCTGGCTGAGCAT 66255 Query 44581 CTCTTCATAGTGATCATAG--GCGTTCTGGGCGTCGTTCATCAGGTAGTGTAGGACCCGC 44638 || || || || |||||| ||| | ||| ||| ||||| | || |||||| Sbjct 66254 TTCCTCGTAATGGTCATAGCTGCGGGC--GGCATCGGATTTCAGGATCTCCAGCACCCGC 66197 Query 44639 TGAGCCTCAGCCCCCTG-AAGAACATTATCATCGCGGCCCTGCCCGTTCACCTTCGACTG 44697 ||||| | || || ||| | | | |||||||| ||| ||| |||| || Sbjct 66196 GCGGCCTCGTCGCCTTGCAAGG----TGGCGCCCCGGCCCTGATTGTTGACCGTCGATTG 66141 Query 44698 GGATGCGAGATCTTGGGGACTTGGGATGTAGAACTCACCCGGCATGATCGAATAGCGGGC 44757 | || |||| || | ||||| ||||| || | |||||| ||||||||||| Sbjct 66140 CGCGGCCAGATGTTCCGCGGCGGGGATATAGAATTCGCGGTCCATGATGGAATAGCGGGC 66081 Query 44758 TGAGTATTCATTCACGTTGGCCGTCCGGTGACGGATCCATTGGCGGGCCACAAACACGGG 44817 |||||||| || || || || || || || | |||||| ||||| || || || | || Sbjct 66080 CGAGTATTCGTTTACATTTGCGGTGCGATGCCTGATCCACTGGCGCGCGACGAAGATCGG 66021 Query 44818 CAGTTTGACATGAAGTTTGATCTCACAACCCTCAAACGGGCTGGTGTGCCAATGGCGCAT 44877 ||||||||| || || |||| ||| || ||| |||||| | | |||||| || ||||| Sbjct 66020 CAGTTTGACGTGCAGCTTGACCTCGCACATCTCGAACGGGGTCGAGTGCCAGTGCCGCAT 65961 Query 44878 AAGGTAGCGGATTAGGTCGCGGTCCTTGCTGACACCCTTGGTGCCCTGACCGTAGGATAC 44937 ||||||||||| ||| ||| ||| | | | || | |||||| || ||| || Sbjct 65960 CAGGTAGCGGATCAGGCCGCTGTCGTCGTTCACCTTCCGGGTGCCAGCGCCATAGCTGAC 65901 Query 44938 GCGGGCCATCTGGACGATAGCGCCGTCCGTGCCCATGTAGTCGATTGGTCGGACAAAGCC 44997 ||| || ||| ||||| ||| | || |||||| |||||||| |||| |||||| Sbjct 65900 GCGCGCGGCCTGCACGATGGCGGCATCGTCGCCCATATAGTCGATCACCCGGATAAAGCC 65841 Query 44998 ATGATCTAGGACC 45010 ||||| || ||| Sbjct 65840 GTGATCCAGCACC 65828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181754156741440