Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020862.2 Length=74485 Score E Sequences producing significant alignments: (Bits) Value seq379 167 1e-36 seq7 82.4 4e-11 >seq379 Length=288837 Score = 167 bits (184), Expect = 1e-36 Identities = 301/440 (68%), Gaps = 0/440 (0%) Strand=Plus/Plus Query 41359 ACAGCTTCCATGAAAGCGTCAGTAACCAAAACAGAAACGTTGAAGTTACGTAGACGAGCA 41418 || || |||||||| || || || |||| ||| || | |||||| |||| || || || Sbjct 226914 ACGGCATCCATGAAGGCATCGGTGACCAGAACCGACAGGTTGAACATACGCAGGCGGGCC 226973 Query 41419 GGGTCTTGTTTAGCTGTAATGAAGTCCATTATATCAGGATGATCACAACGCATTGTAGCC 41478 ||||||| || || |||||| || | ||| || || || || ||||| || ||| Sbjct 226974 GGGTCTTTCTTGGCCTCGATGAAGGCCTCCACATCCGGGTGGTCGCAGCGCATGGTGGCC 227033 Query 41479 ATCATAGCACCACGGCGAGAGCCTGCACTCATGATAGTTTTACACATTGAATCCCAAACA 41538 ||||| || || ||||| || || ||| |||||| || ||||| | |||||| ||| Sbjct 227034 ATCATCGCGCCCCGGCGCGAACCGGCAGACATGATGGTGCGGCACATCGCATCCCAGACA 227093 Query 41539 TCCATAAAGGACAATGGACCACTGGCATCAGATTCTACTGATTTAACAATAGTACCTTTT 41598 ||||| ||| || || || |||||| | | || || || | || Sbjct 227094 TCCATGAAGCTCAGCGGGCCGGAGGCATCGGCGGCGACGCCCTTCACCTCGGCCCCGCGC 227153 Query 41599 GGTCTGATAGTAGAGAAGTCGTAACCAATACCACCACCTTGTTGCATAGTCAGGGCAGCT 41658 || | ||| || ||||| || || || || || || || || ||||| ||||| || ||| Sbjct 227154 GGGCGGATGGTCGAGAAATCATAGCCGATCCCGCCGCCCTGCTGCATGGTCAGCGCGGCT 227213 Query 41659 TCTTTGAGCATGTCAAAGATACCACTCAGACTGTCAGGGACAGTACCCATAACAAAGCAG 41718 || || ||| || || || || || ||||| || || || ||||| ||||||||| Sbjct 227214 TCCTTCAGCGCATCGAAAATGCCCGACATGCTGTCCGGCACGGTGCCCATGACAAAGCAG 227273 Query 41719 TTAAATAGGGTTACTTTTCGTGCGGTTCCTGCACCTGATTGGATACGTCCAGCAGGCAAG 41778 || || || || || | || |||| || ||||| | || || || || |||| | Sbjct 227274 TTGAACAGCGTCACGCTGCGCCCGGTGCCCGCACCGGCGGTAATCCGCCCGGCGGGCAGG 227333 Query 41779 AATTTGAAACCTTCAAGTGC 41798 ||||||| ||||| ||||| Sbjct 227334 TATTTGAAGCCTTCCAGTGC 227353 >seq7 Length=747525 Score = 82.4 bits (90), Expect = 4e-11 Identities = 116/158 (73%), Gaps = 9/158 (6%) Strand=Plus/Plus Query 69768 TGGTGCGTAGAGATGGAATTGAACCACCGACTCTCTGGGCTTCAACCAGAAGCTCTACC- 69826 |||||| |||| ||||| ||||||||||| | | | ||||| | | |||||||| Sbjct 555026 TGGTGCCCAGAGGCGGAATCGAACCACCGACACGCGGATTTTCAATCCGCTGCTCTACCG 555085 Query 69827 CCTGAGCTACCTACGCAAAACTTGGT-GTGCCG----TCAGAGACTTGAACTCTGGACCC 69881 |||||||| || |||||||| | | |||||| || ||| | |||| |||| Sbjct 555086 ACTGAGCTATCTGGGCAAAACTGGTTGGTGCCGCTTATCCGAG--TCGAACGGATGACCT 555143 Query 69882 CCCGATTAAAAGTCGGGTGCTCTAACCAACTGAGCTAA 69919 | ||||| ||||| | |||||| |||||||||||||| Sbjct 555144 ACTGATTACAAGTCAGTTGCTCT-ACCAACTGAGCTAA 555180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237703903879016