Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq140 100 7e-17 seq7 80.6 7e-11 >seq140 Length=372893 Score = 100 bits (110), Expect = 7e-17 Identities = 85/102 (83%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 39878 TGCTCTGCCC-CTGAGAACTGGGCC-GCCTGAAGCTGGAGTTTTCCGCTAAGTTTCCCTG 39935 ||||||| || |||||| |||| || || |||||||||||| |||||||| || | ||| Sbjct 170095 TGCTCTGTCCTCTGAGAGCTGGACCAGCTTGAAGCTGGAGTATTCCGCTACGTCTTCCTA 170154 Query 39936 GCTGGGAGAGGAGCGGAATCGCATGAAGGCATCGAAGTTCAC 39977 || |||||||||||| | || ||||||||||||||||||| Sbjct 170155 GCCGGGAGAGGAGCGAATTCATGTGAAGGCATCGAAGTTCAC 170196 >seq7 Length=747525 Score = 80.6 bits (88), Expect = 7e-11 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 133 GATTGAAAATCCGCGTGTCGGTGGTTCGAATCCGCCTCCGGGCACCACT 181 ||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 555072 GATTGAAAATCCGCGTGTCGGTGGTTCGATTCCGCCTCTGGGCACCACT 555024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128342319429176