Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_020873.1
Length=158621
Score E
Sequences producing significant alignments: (Bits) Value
seq57648 86.0 6e-12
seq21230 82.4 8e-11
>seq57648
Length=6294
Score = 86.0 bits (94), Expect = 6e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 157663 AATGGTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAA 157722
|||||||||| | || ||| |||||| |||||||||||| ||||||| |||| ||||| |
Sbjct 174 AATGGTGCCGGCAGTGGGACTCGAACTCACGACCTACTGATTACAAGTCAGTTGCTCT-A 232
Query 157723 CCAACTGAGCTA 157734
||||||||||||
Sbjct 233 CCAACTGAGCTA 244
>seq21230
Length=25512
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/197 (71%), Gaps = 7/197 (4%)
Strand=Plus/Minus
Query 12307 AAGGG-GATCGTACGGGAACAGGTACAATGTCCGTATTCGGTGCTCAGATGCGTTTCGAC 12365
||||| || ||||| || ||||| ||| || ||||| ||| ||| |||||||| ||
Sbjct 9157 AAGGGCGACCGTACTGGTACAGGAACACGTTCAGTATTTGGTCATCAAATGCGTTTTGAT 9098
Query 12366 TTATCGGAAGGGTTCCCGTTACTTACAACGAAAAGAGTCCCTTTCCGT---ATCGTGGCA 12422
||||| | || ||||| |||| || || |||| ||| | |||||| ||||| ||
Sbjct 9097 TTATCTAACGGTTTCCCACTACTCACCACAAAAAAAGTACATTTCCGCTCAATCGT--CA 9040
Query 12423 CAAGAGCTATTGTGGTTTGTTAAAGGGAGCACGGATTTAAAGTACTTACTAGATAATAAC 12482
|| ||| | |||||| ||||||| || || | | |||||| ||| |||||
Sbjct 9039 TT-GAACTACTTTGGTTTCTTAAAGGTGATACCAATGTTCAATACTTAAAAGACAATAAA 8981
Query 12483 GTACACATTTGGGATGA 12499
|| |||||||||||
Sbjct 8980 GTGACGATTTGGGATGA 8964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506315919795360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |