Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021062.1 Length=40192 Score E Sequences producing significant alignments: (Bits) Value seq34826 163 7e-36 >seq34826 Length=13225 Score = 163 bits (180), Expect = 7e-36 Identities = 195/262 (74%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 31206 ACGGAGTTTCCTATGACTTCCTGCACAAGCAGTTGTTCATGGAGTCCCGCTTCAACCCGA 31265 |||| || | || ||| ||||||||||||| | |||| ||| ||| |||||||| | Sbjct 8082 ACGGGGTCCCTTACGACCTCCTGCACAAGCAACTCTTCAAGGAATCCTCGTTCAACCCTA 8023 Query 31266 ATGCCAAGTCGAAGACCGGCCCTCGTGGTCTCGGTCAGTTCACTACGGCAACCGGTAAGG 31325 | ||| | || || ||||| ||| |||| |||||||| | ||| || || || | Sbjct 8022 AAGCCGTGAGCCCTACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAG 7963 Query 31326 CTTACGGGCTGGAAACCGACGAGGACTTTTTCGATCCTGAGAAGTCCATCGACGCGGCTG 31385 | ||||| ||| ||||| |||||||| ||||| || | |||||||||||||| || | Sbjct 7962 CCTACGGCCTGATCACCGAGGAGGACTTCTTCGACCCCGCCAAGTCCATCGACGCAGCCG 7903 Query 31386 CACGTCACCTGAAGGACAACCTTACGGCGTCCAATGGCGACTACCTTGAAGCTGC-CCTT 31444 | || ||| || |||||||| | ||||||||| |||||| | || |||| || ||| Sbjct 7902 CTCGGCACATGCGCGACAACCTCAAGGCGTCCAACGGCGACGAGCT-GAAGGCGCTCCTG 7844 Query 31445 CTGTACAACCAAGGAGGTGGCC 31466 ||||||||||||| | ||||| Sbjct 7843 ATGTACAACCAAGGGGCTGGCC 7822 Score = 116 bits (128), Expect = 9e-22 Identities = 149/205 (73%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 10805 ATCACCCTGCGTGTGGCTGACTCCAAGGGCAAGACCATGACCGTGGTCCCGAACATTTCC 10864 ||| |||||||||| | |||| ||||||||||| |||| | | ||||||||||| || Sbjct 8545 ATCCCCCTGCGTGTCGTTGACGCCAAGGGCAAGGCCATCGCTGATGTCCCGAACATCTCG 8486 Query 10865 GGTGGCTCGACCCTGAAGCTGCGTTACTCGGTCTTCCCGTACAAGTGGAACACCGCTGTG 10924 |||||||| ||| | || | ||| || |||| ||| |||||| | | ||| Sbjct 8485 GGTGGCTCCGAGGGCAAGGTCCGCTTCTCCATCGTCCCCTACGGCTGGAACCCGACCGTG 8426 Query 10925 GGCGCAAGCGTCAAGCTGCAACTCGAAGGCGTCATGCTGATCGACCTCGTTGAGTTCGGT 10984 ||||| ||| ||||| ||||| |||||| ||||||||| | | || || |||| | | Sbjct 8425 GGCGCCTCCGTGAAGCTCCAACTGGAAGGCTTCATGCTGACCAAACTGGTCGAGTCAGAT 8366 Query 10985 GGTGGCGGTGACGACGAGTGGGGCG 11009 | | ||| | ||||| ||||||| Sbjct 8365 GAT---GGTCAAGACGACTGGGGCG 8344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128217786538928