Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq71469 107 2e-18 seq4656 86.0 7e-12 seq12046 84.2 2e-11 >seq71469 Length=5065 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 |||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 4914 TGGAGACTAGGAGAGTCGAACTCCTGACCTCCTGCGTGCAAAGCAGGCGCTCTACCAACT 4973 Query 35882 GAGCTAATTCCCCA 35895 |||||| |||||| Sbjct 4974 AAGCTAAGTCCCCA 4987 >seq4656 Length=104629 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| | Sbjct 93594 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 93653 Query 35881 TGAGCTAATTCCCC 35894 |||||||||||||| Sbjct 93654 TGAGCTAATTCCCC 93667 >seq12046 Length=50888 Score = 84.2 bits (92), Expect = 2e-11 Identities = 56/61 (92%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 71418 GGTAGGAATCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC-GCTGAGCTA 71476 ||||||| |||||||||||||| || ||||||||||| |||||||||||| ||||||||| Sbjct 7050 GGTAGGATTCGAACCTACGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAGCTGAGCTA 6991 Query 71477 C 71477 | Sbjct 6990 C 6990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570765590039520