Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq22220 96.9 1e-15 >seq22220 Length=23789 Score = 96.9 bits (106), Expect = 1e-15 Identities = 241/363 (66%), Gaps = 10/363 (3%) Strand=Plus/Plus Query 1109 CCCTGGTATGGAAAAAAGCACCGGGACAATACGCTCAGTATGAAACGCTTCTCCAACGGT 1168 ||||||| |||| |||||| | ||||| ||||| | || ||| ||||| | Sbjct 23315 CCCTGGTTTGGACGCAAGCACAGCGACAACACGCTGGACAACAAGGTTTTCGCCAACCGC 23374 Query 1169 CGCGGGTTCTGGTGTCTGGGTGGTAAAGCGGCGAAAAACTATCGTGAGAAATCGGTCGAT 1228 ||| | ||| || || || ||||| || |||||||| |||||||| || | Sbjct 23375 CGCAACCTGTGGATTCGCGGCGGAAAAGCCTCGCGCAACTATCGCGAGAAATC---CGCT 23431 Query 1229 GTCGCCGGT---TACGATGAACTGGCGGCATTCGATGAAGATATTGAGAAAGAGGGATCC 1285 | || | | || || || || || ||||||| || || ||| ||||| || Sbjct 23432 GACGAAGTTATCTATGACGAGCTCTCGAAGTTCGATGCTGACATCGAGGGCGAGGGCTCG 23491 Query 1286 CCGACGTTCCTGGGTGATAAACGTATTGAGGGGTCTGTCTGGCCCAAATCTATTCGCGGC 1345 ||||| |||||||| || || || |||| || | |||| || || || || |||||| Sbjct 23492 CCGACTTTCCTGGGCGACAAGCGCCTTGATGGTGCCGTCTACCCGAAGTCCATCCGCGGC 23551 Query 1346 TCAACGCCAAAAACAAAGGGGACCTGCCAGATTGAGCGTGCTGCCAGCGAGTCCGGGCAT 1405 |||||||| || | |||| | ||||||||| || ||| ||||| | | | Sbjct 23552 TCAACGCCGAAGAAGGAGGGCAGCTGCCAGATCACCAAGGCCGCCGAAGAGTC--GCCCT 23609 Query 1406 TTC--ATGCGTTTTCATGTTGCCTGTCCGCACTGTGGTGAAGAGCAGTACCTTAAATTCG 1463 || |||| || || |||||||| |||||||| |||||||| ||| || | | Sbjct 23610 ATCGACTGCGCTTCCACGTTGCCTGCCCGCACTGCCACAAAGAGCAGACCCTCAAGTGGG 23669 Query 1464 GCG 1466 ||| Sbjct 23670 GCG 23672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147242580387584