Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq4 383 8e-102 seq14 217 7e-52 seq22220 113 2e-20 >seq4 Length=924746 Score = 383 bits (424), Expect = 8e-102 Identities = 638/917 (70%), Gaps = 15/917 (2%) Strand=Plus/Plus Query 64991 GCCCTGGCCGAGGTCGATAAACGCTTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAG 65050 || |||||| || |||| |||| |||||| || |||| ||| || || ||| || Sbjct 25877 GCGCTGGCCCAGATCGAGAAACAGTTCGGCAAGGGCTCGGTCATGCGCCTCGGCGACCAG 25936 Query 65051 CCACAGACTGTGGACGTC------ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTG 65104 || | || | | | || ||| |||| ||||| | | |||||| ||| ||| Sbjct 25937 CCTGACACGGGCGCCATCCCGGCCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTG 25996 Query 65105 GGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGG 65164 |||||||| || || | |||||| | || || ||||||||||| || || || || Sbjct 25997 GGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGC 26056 Query 65165 AAGTCAACTCTGTGTCTCCACGCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGC 65223 ||| | || ||| || || | | ||| ||| ||| |||||||||| ||||| Sbjct 26057 AAGACCACGCTGACCCTGCAGGTCATCGCCGCCTGC-CAGCGCGCCGGTGGCACGGCCGC 26115 Query 65224 CTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGC--GCTCGGTGTGGAC 65281 || | ||||||| ||||| | ||||| || |||||| ||| |||||| || | Sbjct 26116 CTTCGTCGACGCCGAGCATGCGCTGGATCCGCTCTACGCC--GGCAAGCTCGGCGTCAAT 26173 Query 65282 CTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 65341 |||| |||| ||||| ||||||||||| ||||||||||| ||||| ||| ||| Sbjct 26174 GTCGAGGACCTGCTGGTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCACCGAC 26233 Query 65342 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTG 65401 | || || || |||| | | |||| |||| || ||||| || || || || | Sbjct 26234 ATGCTGGTGCGCTCGGGCGCGGTCGACATCATCGTTGTCGACTCCGTCGCCGCGCTCACG 26293 Query 65402 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 65461 ||||||||||| |||| || || || || |||| ||||||||||| || || |||||| Sbjct 26294 CCGCGCGCCGAAATCGAGGGTGAAATGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTC 26353 Query 65462 ATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTC 65521 ||||||||||| |||||||| ||||||||| |||| | ||||| ||| || Sbjct 26354 ATGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGCGTTCCAACTGCCTGGTCATC 26413 Query 65522 TGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACC 65581 | |||||||| | ||| |||||||||| | || | | |||| || |||||| Sbjct 26414 TTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCG---GAAACCACC 26470 Query 65582 ACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCC 65641 || |||||||| || | | |||||||||||| || ||| | || |||| ||||||| | Sbjct 26471 ACCGGCGGCAACGCGCTCAAGTTCTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGC 26530 Query 65642 ACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAAC 65701 | | ||||||||||| || | ||||| ||||| || ||||| ||||||||| Sbjct 26531 GCGGTCAAGGAAGGCGAAGAAGTGGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAAC 26590 Query 65702 AAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG 65761 ||| || | |||||| | | | ||||||||| || | ||||| |||||||| Sbjct 26591 AAGGTGTCGCCGCCGTTCAGGGAGGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAAC 26650 Query 65762 CGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCC 65821 || ||| ||| || ||||||||| |||| || || ||||| | ||||| |||||| Sbjct 26651 CGCCAGGGCGAGATCGTCGACCTGGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCC 26710 Query 65822 TGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTC 65881 |||| | ||| || ||| || ||| ||||||||| ||| ||| | ||| || Sbjct 26711 TGGTACGCCTACCAGGGCAACAAGATCGGGCAGGGCAAGGGCAATGCCTGCAAGTTCCTG 26770 Query 65882 AAGGCCAACCCGGACAT 65898 || |||||||| || Sbjct 26771 CTGGAGAACCCGGATAT 26787 >seq14 Length=669857 Score = 217 bits (240), Expect = 7e-52 Identities = 457/678 (67%), Gaps = 15/678 (2%) Strand=Plus/Plus Query 65090 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 65149 || ||| ||| ||||| ||||| || | |||| |||||| | || ||||||||||| Sbjct 599864 CTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATCGTCGAAATCTACGGG 599923 Query 65150 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 65209 || ||| || || ||| | || ||| || || | ||||||| | | |||||| Sbjct 599924 CCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCCGAAGAGCAGAAAAAG 599983 Query 65210 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 65269 ||||| | ||||| | | || || || || | |||||||| || || | Sbjct 599984 GGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCGATCTATGCGCGTAAG 600043 Query 65270 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 65329 || ||||| |||| || | || || | ||||| ||||||||||| ||||| || Sbjct 600044 CTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACACTGGCGAACAGGCGCTT 600103 Query 65330 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 65389 || |||||||| || || || || | || | |||| || || ||||| || Sbjct 600104 GAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGTGGTGGTCGACTCGGTC 600163 Query 65390 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTG 65449 || || ||| ||| ||||| ||||||||||||| || ||| | |||||| Sbjct 600164 GCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGACGCTACTGTCGGCGCC 600223 Query 65450 CACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA- 65508 || || || || ||| ||||||||||||||||| || | | | ||| | || | || Sbjct 600224 CAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTCGATCGGCCGCTCGAAT 600283 Query 65509 --CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG---GGCTAC 65563 || | | | ||| |||||||| | || |||||||||| || ||| || Sbjct 600284 TGCATGGTCA---TCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTTGGCAAC 600340 Query 65564 GGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATG 65623 |||||| |||||||| || ||| | || ||| ||||| ||| ||||| || Sbjct 600341 --CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTATGCCAGCGTCCGTCTG 600394 Query 65624 GATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGG 65683 || | |||||||||| | || ||||| |||| |||| || |||||| ||||| Sbjct 600395 GACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGTTGGCAACTCGACCCGC 600454 Query 65684 GTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTG 65743 ||||||||||| ||||||||| ||||||||||| | | | ||| ||| || || Sbjct 600455 GTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGTCGAATTCGATATCATG 600514 Query 65744 TACGGGGAGGGCATCTCG 65761 || || |||||||||||| Sbjct 600515 TATGGCGAGGGCATCTCG 600532 >seq22220 Length=23789 Score = 113 bits (124), Expect = 2e-20 Identities = 200/287 (70%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 63455 TGACTGAACTCAAAGACACCAACCCCAAGGACGCCGTAGGCACTGCCA-AGGTCCCGTAC 63513 || ||||||| |||||||||||||| || |||||| | |||| |||| | || | | | Sbjct 17756 TGGCTGAACTGAAAGACACCAACCCGAAAGACGCCATCGGCA--GCCAGAAGTTGCCT-C 17812 Query 63514 TCCAC--GATCCCCGCTCGGGTGGTCGCCGAGGTCGGCCTGGCAATGATGGAAGGCGCCC 63571 | ||| | || | | | ||| || | |||||| ||||||| || || | Sbjct 17813 TGCACCTGTGGCCAACGACCGCGACCGCGATGGGCTGCCTGGGGCTGATGGATGGTGCTC 17872 Query 63572 TGAAGTACGGCCGCCACAACTACCGCGTCTCCGGTGTCCGCGCTTCGGTCTACTACGACG 63631 ||||||| ||||| ||| | ||| | || || || || ||| |||||| ||| | Sbjct 17873 TGAAGTATGGCCGGGCCAATTGGCGCAAGGCTGGGGTGCGGGCCTCGATCTACTTCGATG 17932 Query 63632 CCGCCAAGCGCCACCTGGACGCCTGGTGGGAGGGTCAGGATATCGACCCCGACAGCGGCC 63691 ||||||| || ||||| | || |||| |||||| |||| |||||| |||||||| | Sbjct 17933 CCGCCAACCGGCACCTTGCTGCGTGGTTCGAGGGTGAGGAGGCCGACCCGGACAGCGGGC 17992 Query 63692 TGCCGCACCTCGTGAAAGCCATCGCCTGCCTTGTGGTCGTCCGCGAC 63738 |||||||||| | | | || | || ||||| | | || || |||| Sbjct 17993 TGCCGCACCTGGCGCATGCGCTGGCGTGCCTGGCGATCATCGTCGAC 18039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241698310344812