Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021311.1 Length=76479 Score E Sequences producing significant alignments: (Bits) Value seq4 378 3e-100 seq14 217 7e-52 seq7 116 2e-21 seq22220 113 2e-20 seq43338 82.4 4e-11 >seq4 Length=924746 Score = 378 bits (418), Expect = 3e-100 Identities = 637/917 (69%), Gaps = 15/917 (2%) Strand=Plus/Plus Query 66600 GCCCTGGCCGAGGTCGATAAACGCTTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAG 66659 || |||||| || |||| |||| |||||| || |||| ||| || || ||| || Sbjct 25877 GCGCTGGCCCAGATCGAGAAACAGTTCGGCAAGGGCTCGGTCATGCGCCTCGGCGACCAG 25936 Query 66660 CCACAGACTGTGGACGTC------ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTG 66713 || | || | | | || ||| |||| ||||| | | |||||| ||| ||| Sbjct 25937 CCTGACACGGGCGCCATCCCGGCCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTG 25996 Query 66714 GGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGG 66773 |||||||| || || | |||||| | || || ||||||||||| || || || || Sbjct 25997 GGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGC 26056 Query 66774 AAGTCAACTCTGTGTCTCCACGCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGC 66832 ||| | || ||| || || | | ||| ||| ||| |||||||||| ||||| Sbjct 26057 AAGACCACGCTGACCCTGCAGGTCATCGCCGCCTGC-CAGCGCGCCGGTGGCACGGCCGC 26115 Query 66833 CTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGC--GCTCGGTGTGGAC 66890 || | ||||||| ||||| | ||||| || |||||| ||| |||||| || | Sbjct 26116 CTTCGTCGACGCCGAGCATGCGCTGGATCCGCTCTACGCC--GGCAAGCTCGGCGTCAAT 26173 Query 66891 CTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 66950 |||| |||| ||||| ||||||||||| ||||||||||| ||||| ||| ||| Sbjct 26174 GTCGAGGACCTGCTGGTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCACCGAC 26233 Query 66951 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTG 67010 | || || || |||| | | |||| |||| || ||||| || || || || | Sbjct 26234 ATGCTGGTGCGCTCGGGCGCGGTCGACATCATCGTTGTCGACTCCGTCGCCGCGCTCACG 26293 Query 67011 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 67070 ||||||||||| |||| || || || || |||| ||||||||||| || || |||||| Sbjct 26294 CCGCGCGCCGAAATCGAGGGTGAAATGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTC 26353 Query 67071 ATGTCACAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTC 67130 ||||| ||||| |||||||| ||||||||| |||| | ||||| ||| || Sbjct 26354 ATGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGCGTTCCAACTGCCTGGTCATC 26413 Query 67131 TGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACC 67190 | |||||||| | ||| |||||||||| | || | | |||| || |||||| Sbjct 26414 TTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCG---GAAACCACC 26470 Query 67191 ACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCC 67250 || |||||||| || | | |||||||||||| || ||| | || |||| ||||||| | Sbjct 26471 ACCGGCGGCAACGCGCTCAAGTTCTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGC 26530 Query 67251 ACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAAC 67310 | | ||||||||||| || | ||||| ||||| || ||||| ||||||||| Sbjct 26531 GCGGTCAAGGAAGGCGAAGAAGTGGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAAC 26590 Query 67311 AAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG 67370 ||| || | |||||| | | | ||||||||| || | ||||| |||||||| Sbjct 26591 AAGGTGTCGCCGCCGTTCAGGGAGGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAAC 26650 Query 67371 CGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCC 67430 || ||| ||| || ||||||||| |||| || || ||||| | ||||| |||||| Sbjct 26651 CGCCAGGGCGAGATCGTCGACCTGGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCC 26710 Query 67431 TGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTC 67490 |||| | ||| || ||| || ||| ||||||||| ||| ||| | ||| || Sbjct 26711 TGGTACGCCTACCAGGGCAACAAGATCGGGCAGGGCAAGGGCAATGCCTGCAAGTTCCTG 26770 Query 67491 AAGGCCAACCCGGACAT 67507 || |||||||| || Sbjct 26771 CTGGAGAACCCGGATAT 26787 >seq14 Length=669857 Score = 217 bits (240), Expect = 7e-52 Identities = 457/678 (67%), Gaps = 15/678 (2%) Strand=Plus/Plus Query 66699 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66758 || ||| ||| ||||| ||||| || | |||| |||||| | || ||||||||||| Sbjct 599864 CTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATCGTCGAAATCTACGGG 599923 Query 66759 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66818 || ||| || || ||| | || ||| || || | ||||||| | | |||||| Sbjct 599924 CCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCCGAAGAGCAGAAAAAG 599983 Query 66819 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 66878 ||||| | ||||| | | || || || || | |||||||| || || | Sbjct 599984 GGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCGATCTATGCGCGTAAG 600043 Query 66879 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66938 || ||||| |||| || | || || | ||||| ||||||||||| ||||| || Sbjct 600044 CTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACACTGGCGAACAGGCGCTT 600103 Query 66939 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 66998 || |||||||| || || || || | || | |||| || || ||||| || Sbjct 600104 GAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGTGGTGGTCGACTCGGTC 600163 Query 66999 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTG 67058 || || ||| ||| ||||| ||||||||||||| || ||| | |||||| Sbjct 600164 GCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGACGCTACTGTCGGCGCC 600223 Query 67059 CACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA- 67117 || || || || ||| ||||||||||||||||| || | | | ||| | || | || Sbjct 600224 CAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTCGATCGGCCGCTCGAAT 600283 Query 67118 --CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG---GGCTAC 67172 || | | | ||| |||||||| | || |||||||||| || ||| || Sbjct 600284 TGCATGGTCA---TCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTTGGCAAC 600340 Query 67173 GGCCCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATG 67232 |||||| |||||||| || ||| | || ||| ||||| ||| ||||| || Sbjct 600341 --CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTATGCCAGCGTCCGTCTG 600394 Query 67233 GATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGG 67292 || | |||||||||| | || ||||| |||| |||| || |||||| ||||| Sbjct 600395 GACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGTTGGCAACTCGACCCGC 600454 Query 67293 GTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTG 67352 ||||||||||| ||||||||| ||||||||||| | | | ||| ||| || || Sbjct 600455 GTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGTCGAATTCGATATCATG 600514 Query 67353 TACGGGGAGGGCATCTCG 67370 || || |||||||||||| Sbjct 600515 TATGGCGAGGGCATCTCG 600532 >seq7 Length=747525 Score = 116 bits (128), Expect = 2e-21 Identities = 325/496 (66%), Gaps = 7/496 (1%) Strand=Plus/Minus Query 66831 GCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGAC 66890 |||| ||||| || ||||| | |||| || | ||| || ||| | || ||||| Sbjct 602216 GCCTTTATCGATGCCGAGCATGCGTTGGATCCGGTGTATGCGAAGAAATTAGGCGTGGAT 602157 Query 66891 CTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 66950 |||| || || | || |||||| || || || |||||||| ||||||||| || Sbjct 602156 GTCGATAAGCTGTTAGTTTCTCAGCCAGATACCGGTGAGCAGGCGCTGGAGATCTGCGAT 602097 Query 66951 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTG 67010 | | || |||| || | | | || | || ||||| || || || | | Sbjct 602096 ATGTTGGTACGCTCTGCCGCCGTAGACGTGGTGATTGTGGACTCGGTCGCTGCGTTAACG 602037 Query 67011 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 67070 || || || | ||||| ||||| || ||||| || | || | || || || | Sbjct 602036 CCAAAAGCAGAAATTGAAGGTGACATGGGTGACAGCCATATGGGTTTACAGGCCCGTTTA 601977 Query 67071 ATGTCACAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTC 67130 ||||||||||| |||| || || || | | ||| || |||| || ||| || Sbjct 601976 ATGTCACAGGCACTGCGTAAACTGACTGCTAATATCAAACGCTCCAATACCCTGTGTATC 601917 Query 67131 TGGGTCAACCAGTTGCGCGAGAAGATCG--GCAACGTGGGCTACGGCCCGAATGAGACCA 67188 | |||||||| | || |||||||| | || || | || |||| || |||| Sbjct 601916 TTTATCAACCAGATCCGGATGAAGATCGGTGTAATGTTTGGTA--ACCCG---GAAACCA 601862 Query 67189 CCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCG 67248 |||| ||||| || || ||| ||||| |||||||| || | ||| ||||||| || | Sbjct 601861 CCACTGGCGGTAATGCGCTGAAATTCTATGCCTCAGTACGTTTAGATATCCGTCGTATTG 601802 Query 67249 CCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGA 67308 | | | || ||||| ||||| | ||| ||| |||||||| ||||| || || | Sbjct 601801 GCTCGGTAAAAGAAGGTGATGAAATTACCGGTAACGAAACCCGGGTTAAGGTGGTAAAAA 601742 Query 67309 ACAAGCTGGCCCCGCC 67324 |||| |||| ||||| Sbjct 601741 ACAAAGTGGCTCCGCC 601726 >seq22220 Length=23789 Score = 113 bits (124), Expect = 2e-20 Identities = 200/287 (70%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 65064 TGACTGAACTCAAAGACACCAACCCCAAGGACGCCGTAGGCACTGCCA-AGGTCCCGTAC 65122 || ||||||| |||||||||||||| || |||||| | |||| |||| | || | | | Sbjct 17756 TGGCTGAACTGAAAGACACCAACCCGAAAGACGCCATCGGCA--GCCAGAAGTTGCCT-C 17812 Query 65123 TCCAC--GATCCCCGCTCGGGTGGTCGCCGAGGTCGGCCTGGCAATGATGGAAGGCGCCC 65180 | ||| | || | | | ||| || | |||||| ||||||| || || | Sbjct 17813 TGCACCTGTGGCCAACGACCGCGACCGCGATGGGCTGCCTGGGGCTGATGGATGGTGCTC 17872 Query 65181 TGAAGTACGGCCGCCACAACTACCGCGTCTCCGGTGTCCGCGCTTCGGTCTACTACGACG 65240 ||||||| ||||| ||| | ||| | || || || || ||| |||||| ||| | Sbjct 17873 TGAAGTATGGCCGGGCCAATTGGCGCAAGGCTGGGGTGCGGGCCTCGATCTACTTCGATG 17932 Query 65241 CCGCCAAGCGCCACCTGGACGCCTGGTGGGAGGGTCAGGATATCGACCCCGACAGCGGCC 65300 ||||||| || ||||| | || |||| |||||| |||| |||||| |||||||| | Sbjct 17933 CCGCCAACCGGCACCTTGCTGCGTGGTTCGAGGGTGAGGAGGCCGACCCGGACAGCGGGC 17992 Query 65301 TGCCGCACCTCGTGAAAGCCATCGCCTGCCTTGTGGTCGTCCGCGAC 65347 |||||||||| | | | || | || ||||| | | || || |||| Sbjct 17993 TGCCGCACCTGGCGCATGCGCTGGCGTGCCTGGCGATCATCGTCGAC 18039 >seq43338 Length=9689 Score = 82.4 bits (90), Expect = 4e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 67181 TGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG 67240 ||| || || || ||||| || || | | |||||||| ||||| || || ||| | || Sbjct 5571 TGAAACAACAACAGGCGGTAACGCACTTAAATTCTACGCTTCAGTACGTATCGATATTCG 5630 Query 67241 TCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGT 67300 ||| || | | | ||| ||||||||||||| ||| || ||| ||||| || || || Sbjct 5631 TCGTATTGGTTCAGTGAAAGAAGGCGATGAGGTTGTTGGTAACGAAACCCGCGTTAAAGT 5690 Query 67301 CGTCAAGAACAAGCTGGCCCCGCCG 67325 || || |||||| | || |||||| Sbjct 5691 TGTTAAAAACAAGGTTGCTCCGCCG 5715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244070687646240