Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq10932 104 5e-18 >seq10932 Length=55943 Score = 104 bits (114), Expect = 5e-18 Identities = 219/327 (67%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 1906 GCTACTTCGGCAGTAAGTTTCGCGTCGCGCCGTGGGTGCTCTCGCACCTGCCGTCGCATG 1965 ||||| |||||| ||||||||| | ||||||||| | || |||||||| ||| Sbjct 8183 GCTACCACGGCAGCAAGTTTCGCCTGGCGCCGTGGATCATCGAACACCTGCCCGAGCACA 8124 Query 1966 AAATCTACGTCGAACCGTTCGGTGGCTCGGCTGGTGTGCTGCTGCAAAAGCCGCGAAGCC 2025 ||||||||| || || || || | | ||| || || |||| || || || | Sbjct 8123 CGTGCTACGTCGAGCCTTTTGGCGGTGCCGGTGGCGTCCTAATGCAGAAACCACGCGCCT 8064 Query 2026 GTGTCGAGATTTACAACGATCTCGACGGCGAAATCGTGAACCTATTCCGCGTGGTGCGTG 2085 | ||| | |||||||| ||||||||||| || ||||| || ||||||||| ||| Sbjct 8063 ACGCTGAGGTCTACAACGACCTCGACGGCGACATAGTGAATCTGTTCCGCGTGCTGCAAA 8004 Query 2086 ATGACGCGATGCGAGCGCAGTTGGTCGACGCGTTGAACGCGACGCCATATGCCCGGGCCG 2145 | || | ||| ||| | |||| | ||| | ||| || || ||| ||| || Sbjct 8003 ACGAGACATCCCGATCGCGCCTTTTCGAAACTCTGACCATGACTCCGTACGCCAGGGACG 7944 Query 2146 AGTTCGAAGCAGCGTGGACCGTGGCAGACGAACCGGTCGAGCGCGCACGCCGCTTGTGCG 2205 ||||||| || ||| ||||| || ||||| || || || | || | Sbjct 7943 AGTTCGAGCTGGCCTGGGAGCAGGCAGCAGATCCGGTTGAACGGGCCAGGCGGACCATCA 7884 Query 2206 TTCGTGCACAGATGGGTTTCGGGTCAG 2232 ||||||| |||||||| ||||| |||| Sbjct 7883 TTCGTGCTCAGATGGGCTTCGGATCAG 7857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113012001324544