Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021347.1 Length=142563 Score E Sequences producing significant alignments: (Bits) Value seq363 122 8e-23 >seq363 Length=289854 Score = 122 bits (134), Expect = 8e-23 Identities = 230/331 (69%), Gaps = 12/331 (4%) Strand=Plus/Minus Query 104974 TCGATCGCGAGAAGTACTGGGCGCGTGTGGAGATGGAGGTCCGCACCATCA-CCAGCAAG 105032 |||| |||||| ||| | ||||| ||||| | ||| || || ||||| |||| | Sbjct 188751 TCGAGCGCGAG---TACCGCGCGCGCCTGGAGTTCGAGCTCAACATCATCAACCAGATGG 188695 Query 105033 AACTTCGCCGGGTACTTCAACGTCGTCGCCGACTACACCAAGTGGGCTAAGGACC---GC 105089 ||| | || |||||| ||||| |||| || | ||||| ||| || || Sbjct 188694 GTTTTC-CGGGCTACTTCCTGATCGTCATGGACTTCATCCGCTGGGCCAAGAACAACGGC 188636 Query 105090 ATGCTCGTCGGTCCCGGCCGTGGTTCGGCCGGTGGCTCGCTCGTCTCGTACCTGATGGAC 105149 ||| || || || || || ||||| | || |||||||| || | ||| | || | Sbjct 188635 GTGCCGGTGGGGCCGGGTCGCGGTTCCGGCGCCGGCTCGCTGGTGGCTTACTCGCTGTTC 188576 Query 105150 ATCACCGAGCTCGACCCGATCAAGTACGACCTGATGTTCGAGCGGTTCATCTCGCCGGAG 105209 |||||||| || || |||||||||||||||||| |||||||||| ||| || || ||| Sbjct 188575 ATCACCGACCTGGATCCGATCAAGTACGACCTGCTGTTCGAGCGCTTCCTCAATCCCGAG 188516 Query 105210 CGGAAGAACTTCCCCGACATCGATCTCGACTTCCCGCA--GAAGCGTCGCGGCGAGGTCG 105267 || | | | |||||| |||| ||||||| | ||| |||| | |||| | ||| Sbjct 188515 CGCGTGTCCATGCCCGACTTCGACATCGACTT-CTGCATGGAAG-GGCGCGACCGCGTCA 188458 Query 105268 TCGACTACATCGCCGACCGCTACGGCCACGA 105298 |||| ||| | |||| | |||||||| ||| Sbjct 188457 TCGAGTACGTGGCCGGGCACTACGGCCGCGA 188427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455046088982880