Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq6372 194 2e-44 seq26 179 5e-40 seq163424 141 1e-28 >seq6372 Length=86001 Score = 194 bits (214), Expect = 2e-44 Identities = 190/245 (78%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAAC 99005 ||| ||||||||||||| || ||||| | |||||| |||||||||||||| || Sbjct 39810 AAGGAAGACCGTACCGGCACGGGCACCTACAGCGTGTTCGGCTACCAGATGCGTTTCGAC 39751 Query 99006 TTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCAT 99065 || || |||||||| | || || |||||| |||||||||||||| || ||||| Sbjct 39750 CTGGCCGATGGTTTCCCCATCGTCACCACCAAGAAGTGCCACCTGCGCTCGATCATCCAC 39691 Query 99066 GAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTA 99125 || |||||||||||||| | ||||||||||| ||| ||||||| || || || || || Sbjct 39690 GAGCTGCTGTGGTTCCTCCAGGGCGACACCAACATCAAGTACCTCAAGGACAACGGCGTC 39631 Query 99126 ACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAG 99185 | ||| |||||||| ||||| ||| | || ||| ||||||| ||||| ||||| | ||| Sbjct 39630 AGCATCTGGGACGAGTGGGCCGACGAGAACGGCAACCTCGGCCCGGTCTACGGCTACCAG 39571 Query 99186 TGGCG 99190 ||||| Sbjct 39570 TGGCG 39566 >seq26 Length=549101 Score = 179 bits (198), Expect = 5e-40 Identities = 189/246 (77%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAAC 99005 |||| ||||| ||||| || ||||| || | ||||||||||||||||| ||| || Sbjct 240146 AAGAGCGACCGCACCGGCACCGGCACCTACTCGGTGTTCGGCCACCAGATGCGCTTCGAC 240205 Query 99006 TTGCAAGAAGGTTTCCCGCTGGTAACGACCAAG-CGTTGCCACCTGCGCTCTATTATCCA 99064 || ||||| |||||| || | || |||||| | || |||||| || || ||||| Sbjct 240206 CTGGCCGAAGGCTTCCCGGTGCTGACCACCAAGAAGCTG-CACCTGAAGTCGATCATCCA 240264 Query 99065 TGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGT 99124 |||||||||||||||||| | ||||||||||| |||| |||||||| || | || || Sbjct 240265 CGAACTGCTGTGGTTCCTGCAGGGCGACACCAACATCCGCTACCTGAAGGAACACGGCGT 240324 Query 99125 AACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCA 99184 ||| |||||||| ||||| ||| | || ||||||||||| ||||| ||||| | || Sbjct 240325 GCGCATCTGGGACGAGTGGGCCGACGAGAACGGCGACCTCGGACCGGTCTACGGCTACCA 240384 Query 99185 GTGGCG 99190 |||||| Sbjct 240385 GTGGCG 240390 >seq163424 Length=1083 Score = 141 bits (156), Expect = 1e-28 Identities = 183/248 (74%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 98946 AAGAAAGACCGTACCGGTACAGGCACGCTTTC--TATCTTCGGCCACCAGATGCG-TTTC 99002 |||| || || ||||| || ||||| || | | | || ||||| |||||||| ||| Sbjct 750 AAGAGTGATCGCACCGGCACCGGCAC--TTACAGTGTGTTTGGCCATCAGATGCGCTTTG 807 Query 99003 AACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATC 99062 | || || || || || |||||||| || |||||| || || || || || ||| Sbjct 808 ATCTGGCC-GAGGGCTTTCCGCTGGTGACCACCAAGAAGTGTCATCTCAAGTCCATCATC 866 Query 99063 CATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGT 99122 || || ||||||||||| || | ||||| ||||| |||| ||| ||||| || || || Sbjct 867 CACGAGCTGCTGTGGTTTTTGCAGGGCGATACCAACATCCGGTATCTGAAGGAAAACGGC 926 Query 99123 GTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAG 99182 || |||| |||||||| ||||| ||| | ||||||||||| || ||||| || || | Sbjct 927 GTCTCCATCTGGGACGAGTGGGCAGACGAGAATGGCGACCTGGGGCCGGTCTATGGCTAT 986 Query 99183 CAGTGGCG 99190 |||||||| Sbjct 987 CAGTGGCG 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715022253121440