Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq1 349 1e-91 seq14 129 2e-25 seq50 91.5 5e-14 >seq1 Length=1655743 Score = 349 bits (386), Expect = 1e-91 Identities = 552/788 (70%), Gaps = 6/788 (1%) Strand=Plus/Plus Query 41525 CCGCTGATCATTGATAGCTTCGCCGGAGGCGGCGGCGCCTCCACCGGAATCGAGATGGCG 41584 ||| ||||| | || ||||| ||||| |||||||||||||| ||||| ||||||||||| Sbjct 406127 CCGATGATCGTGGACAGCTTTGCCGGTGGCGGCGGCGCCTCGACCGGGATCGAGATGGCC 406186 Query 41585 CTGGGTCGCTCGCCTGACCTTGCCATCAATCATAATCCGCAGGCTCTTGCGCTGCATGGC 41644 || || ||| || || | || ||||| || | | || || ||||| |||| Sbjct 406187 CTTGGCCGCAGCCCGGATATCGCGATCAACCACAGCGAGGCAGCGCTGGCGCTACATGCG 406246 Query 41645 GCCAATCACCCTGATACGCTGCACATCTCGGAAAACATCTACAAGGTCGATCCGTTGGAC 41704 || || ||||| || ||||||||| | ||||||||| |||| ||||||||| || | Sbjct 406247 GCGAACCACCCCGAGACGCTGCACCTGTCGGAAAACGTCTATCGCGTCGATCCGCTGACC 406306 Query 41705 TATGTCGCCGGCCAGCATATCGGCCTTGCCTGGTTCTCTCCCGATTGCAAACATTTCAGC 41764 | | ||| | ||| |||||||| |||||| || || ||||| || |||||| Sbjct 406307 CACATGCACGGGCGGCACATCGGCCTGATGTGGTTCAGCCCGGACTGCAAGCACTTCAGC 406366 Query 41765 AAGGCCAAGGGTGGCAAGCCGGTCGAGCGTAATATCCGAGACCTCGCTCATATCATTCCG 41824 ||||||||||| ||| |||||| |||| || ||||| || || || ||||| || Sbjct 406367 AAGGCCAAGGGCGGCGCCCCGGTCAAGCGCAACATCCGCGATCTGGCGTGGATCATCCCC 406426 Query 41825 TTCTGGGTTGAGCGTGTCCAGAAAAGCGGAGGCAAGATCGACGTTATCATTATGGAGAAC 41884 ||| | ||||| |||||||| || || | || || | | ||||||| Sbjct 406427 GGATGGATCGAGCGCATCCAGAAATCAGGCGGGCGCGTGGATGTGGTGGTGGTGGAGAAT 406486 Query 41885 GTTGAAGAATTTGCGACGTGGGGGCCGCTCGTCCAGACTGACCGGGGATTGATGCCGGAT 41944 || || || || || |||||||| || || | || ||| ||| |||||||| Sbjct 406487 GTGGAGGAGTTCCGCACCTGGGGGCCACTGATCGAAACCGACAAGGGGTTGATGCCCTGC 406546 Query 41945 CCGGATCGGAAAGGCGAAACCTTTCAGCAATGGTGCAAGAAGCTTCGCCGCCTCGGCGGC 42004 || || ||| ||||||||||| | |||||||||| || ||||| || ||||| Sbjct 406547 CCCGACCGGCGCGGCGAAACCTTCGCGGCATGGTGCAAGGCACTGCGCCGTCTTGGCGGG 406606 Query 42005 AAGCTGGAGAAACGGGAATTGCGCGCATGCGATTACGGCGCACCGACGATCCGCAAGCGC 42064 | || || ||| ||||||| || || || ||| | ||||| |||||||||||| Sbjct 406607 CGCATCCAGTGGCGCGAACTGCGCGCCTGAGACTATGGCACCCCGACTATCCGCAAGCGC 406666 Query 42065 CTTTTCGTCATCATCCGTTTTGATGGTCAAAAGATCGTCTGGCCGGAACCGACGCACGGC 42124 || |||||| | | || || || | |||||||||||||||| | || || |||||| Sbjct 406667 CTGTTCGTCGTGGTGCGGTTCGACCGCGAAAAGATCGTCTGGCCAAAGCCCACCCACGGC 406726 Query 42125 GCGCCCGATGATGCCGACGTGATCGCCGGTCGCAAGCT---ACCGTGGCGCACTGCGGCA 42181 | |||| || | || | | || | ||||||| ||||||||||| ||||| Sbjct 406727 G-ACCCG--GAATCGGATGAGGTCCGCAAGGGCAAGCTGAAGCCGTGGCGCACCGCGGCG 406783 Query 42182 GAATGCATCGACTGGTCGATCCCATGCCCGTCGATCTTCGATAGCTCGGCCGATATCGCC 42241 ||||||||||||||||| | | |||||||||||||| || | ||| ||||| ||| Sbjct 406784 GAATGCATCGACTGGTCTCTGTCCTGCCCGTCGATCTTTGACACCTCTGCCGACATCATG 406843 Query 42242 GAGAAGCACGGTCTGAAGGCTATCAGGCCTCTGGCGGACAACACTATGGCTCGTGTCGCG 42301 | |||||||| ||| || || |||||||| |||||| | || || || ||| Sbjct 406844 GCCAAGCACGGCCTGCGCGCCGTCCGGCCTCTGAAACCCAACACCCTCGCCCGCGTGGCG 406903 Query 42302 CGCGGCAT 42309 || ||||| Sbjct 406904 CGTGGCAT 406911 Score = 122 bits (134), Expect = 3e-23 Identities = 175/243 (72%), Gaps = 14/243 (6%) Strand=Plus/Plus Query 43271 ACCACGAAAGACCGGCATGGC-CATGTCGAGGCGGCGCTTGATGTTCCGCCATTTA---C 43326 || || |||||||| |||||| || |||||| |||| | | ||||| || | Sbjct 407634 ACAACCAAAGACCG-CATGGCACACTGCGAGGCATCGCTGGCCGCGCCGCCCTTCGGCCC 407692 Query 43327 CGAAGTGCAGGCC---GCCCGCGCCCGAGAAGTCGCGGCGTTCATGCGGGCGCACGGGTT 43383 |||| || ||| ||||||||| ||||| | | |||| | |||||||| Sbjct 407693 CGAACATCACGCCAAGGCCCGCGCC------GTCGCCCAGCTGCTGCGTGATCACGGGTT 407746 Query 43384 CTGGGATGAGCGCGAATTCGTAACCCTCGATATCGACGGTCACACCTTCGTCATCGTCGA 43443 |||||||| || || ||||| || || | |||||| | |||||||||||||| Sbjct 407747 ATGGGATGACCGGGAGTTCGTGACGCTGACCGTGGACGGTGCCGAGTTCGTCATCGTCGA 407806 Query 43444 TATCGGCATGCGGATGCTCACCCCGCGCGAACTGTTCAATGCGCAGGGCTTTCCGGGTGA 43503 ||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||| || Sbjct 407807 AATCGGCATGCGCATGCTGACCCCGCGCGAACTGTTCACGGCGCAGGGCTTCCCGCCGGA 407866 Query 43504 TTA 43506 ||| Sbjct 407867 TTA 407869 >seq14 Length=669857 Score = 129 bits (142), Expect = 2e-25 Identities = 218/313 (70%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 31492 CAACACCACTTCGGTTGTGTAGCGATCACCACCG-TCGGAGTGCTGCCACTTGCGGGTTT 31550 || ||| | |||||| || |||||||| ||| || || | |||||| |||||||||| Sbjct 425341 CAGCACGATTTCGGTCGTATAGCGATCCTGCCCGCTCTGA-TCCTGCCATTTGCGGGTTT 425399 Query 31551 GCAGCTTGCCCTCGATGTAAACCTTCGATCCCTTTTTCAGGTATTGCTCGCAAACCTTGA 31610 |||| ||||||||| || ||||| ||||| ||| ||||||||| | |||| Sbjct 425400 CAAGCTGGCCCTCGATATAGACCTTGCTGCCCTTGCGCAGATATTGCTCGGCGATCTTGG 425459 Query 31611 CGAGACCTTCGGTGAAGACGACGACGCTATGCCACTCGGTGCGCTCCTTGCGGTCGCCGC 31670 | || ||| |||| | | |||| |||||| |||||||| |||||||| ||||| Sbjct 425460 CCAGCGGCTCGCTGAAAATGGCGACCGAATGCCATTCGGTGCGTTCCTTGCGCTCGCCCG 425519 Query 31671 TGTCGCGGTCGCGCCAGCTTTCGGAAGTCGCAAGGCGAAGGCTGGCGATGCTACCCCCGG 31730 || |||||||||||| |||| || || || | ||| ||| | | | | || ||| Sbjct 425520 AGTTCCGGTCGCGCCAGGTTTCCGAGGTGGCGATGCGCAGGTTCACCACCTTGCCGCCGT 425579 Query 31731 CTTGTGTCTTTCGGATTTCCGGATCGGCGCCGAGATGGCCGATAAGAATGACTTTGTTGA 31790 || | || | || |||||| |||||| | ||| | | ||||| ||||||| Sbjct 425580 TCTGGAAGCTGCGCACCTCGGGATCGCGGCCGAGGTTGCCCACGATGATGACCTTGTTGA 425639 Query 31791 CGCTACCGGCCAT 31803 | ||| ||||| Sbjct 425640 CCGAACCCGCCAT 425652 >seq50 Length=481860 Score = 91.5 bits (100), Expect = 5e-14 Identities = 201/291 (69%), Gaps = 9/291 (3%) Strand=Plus/Minus Query 31501 TTCGGTTGTGTAGCGATCACCACCGT-CGGAGTGCTGCCACTTGCGGGTTTGCAGCTTGC 31559 |||||| ||||| || || | || | | || | ||||||||| ||||||| |||||||| Sbjct 154949 TTCGGTGGTGTAACGCTCTACGCCTTGCTGA-TCCTGCCACTTACGGGTTTTCAGCTTGC 154891 Query 31560 CCTCGATGTAAACCTTCGATCCCTTTTTCAGGTATT-GCTCGCAAACCTTGACGAGACCT 31618 | ||||| || ||||| || || || ||| |||| || |||| || | |||| Sbjct 154890 CTTCGATATACACCTTAGAGCCTTTACGCAGATATTCGCCGGCAATTTCTGCC-AGACGC 154832 Query 31619 TCGGTGAAGACGACGACGCTATGCCACTCGGTGCGCTCCTTGCGGTCGCCGCTGTCGCGG 31678 | ||| || ||||| | ||||| ||||| |||| || |||||| | | Sbjct 154831 T-GGTAAATT--ACGACCCGGTGCCATTCGGTTTGCTCTTTCATTTCGCCGGTAGCTTTA 154775 Query 31679 TCGCGCCAGCTTTCGGAAGTCGCAAGGCGAAGGCTGGCGATGCTACC-CCCGGCTTGTGT 31737 || ||||||||| || ||||||| || ||| | |||| | || ||| || | | Sbjct 154774 TCTTTCCAGCTTTCAGAGGTCGCAATGCTCAGGTTAGCGACGGCGCCGCCCTGCG-GCAT 154716 Query 31738 CTTTCGGATTTCCGGATCGGCGCCGAGATGGCCGATAAGAATGACTTTGTT 31788 | |||| ||||||||| ||| |||| ||||| | |||||||||||| Sbjct 154715 ATAACGGACTTCCGGATCCTGGCCCAGATTACCGATTAAAATGACTTTGTT 154665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169441366362048