Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021563.1 Length=42724 Score E Sequences producing significant alignments: (Bits) Value seq112276 80.6 7e-11 >seq112276 Length=1639 Score = 80.6 bits (88), Expect = 7e-11 Identities = 120/168 (71%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 3176 GCATAGTCGAGCACTAATGCA-TCTTCCTTTCCTTCGCATAGGCGCAGCGACCTACCGAT 3234 ||||| || | ||||| ||| |||| |||||||||| || || || | ||| | Sbjct 1219 GCATAATCAATAACTAA-GCAGTCTTTTTTTCCTTCGCTTAAACGAAGGCCTCGACCCAC 1161 Query 3235 AATTTGTTGCAGCAACCCGGGTGATTCGGTGGCTCGCAGAATAGCAATCAGGTCAACGTG 3294 |||||||| || | | |||||||||| || | ||| ||||| |||||||| Sbjct 1160 TATTTGTTGATATAAACTGACAGATTCGGTGGGCCGTAAAATCGCAATATAATCAACGTG 1101 Query 3295 AGGGGCATCAAAGCCAGTAGTCAACACGTCGACATTAACCAGATATTT 3342 ||||||||||||||| || || | ||| |||||||||| ||| || Sbjct 1100 AGGGGCATCAAAGCCCGTCGTGAGTACGGATACATTAACCAAATACTT 1053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136302844951952