Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq128 116 2e-21 seq3662 82.4 4e-11 >seq128 Length=380166 Score = 116 bits (128), Expect = 2e-21 Identities = 211/306 (69%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 12405 CAGGTGAAACCAAGTTAATTGAAACTGGTTTGGCTATTCATCTGGACGATGTACATGTAG 12464 |||||||||| || || |||||||||| || ||| || | || ||| | || | | Sbjct 373898 CAGGTGAAACGGTTTTGGTTAAAACTGGTTTAGCAATTTATATTGAAGATCCAAATTTTG 373839 Query 12465 CTGCAATGATTCTTCCTCGTTCAGGTCTAGGCCATAAACATGGTGTAGTGCTTGGGAACC 12524 ||| | ||| | ||||| |||||||| || |||||||||||| | ||| | || ||| Sbjct 373838 CTGGTTTAATTTTACCTCGCTCAGGTCTTGGTCATAAACATGGTATTGTGTTAGGTAACT 373779 Query 12525 TTACTGGTCTGATTGATTCAGATTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGCT 12584 | ||| | ||||| || |||||||| || || |||||||| | |||||||| | Sbjct 373778 TGGTCGGTTTAATTGACTCTGATTATCAAGGAGAGCTTATGGTTTCTGTTTGGAATCG-T 373720 Query 12585 CTACAGAGCCTTTTACTGTTA-ACCCTGGTGACCGTATTGCTCAGATGGTAATCGTGCCT 12643 || | || | ||| | || ||||| ||| | || || ||| |||| ||| Sbjct 373719 GGGCAAAATACCTTCCGTTTAGAACCAGGTGAGCGTTTGGCACAATATGTACTCGTTCCT 373660 Query 12644 GTAATGCAGCCTGAGTTCGTTGTAGTGGATTCATTTGAATCTACTGAACGTGGTGCTGGT 12703 ||| | || ||||||| | |||| || |||| | ||||| |||||||||||| Sbjct 373659 GTAGTACAAGCTGAGTTTGAACAAGTGAATGAGTTTGTTGCGACTGAGCGTGGTGCTGGT 373600 Query 12704 GGCTTT 12709 || ||| Sbjct 373599 GGTTTT 373594 >seq3662 Length=120183 Score = 82.4 bits (90), Expect = 4e-11 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 12349 AGGTTCTGCTGGTGTAGACTTACGCGCTAACACCTCTGAACCATTTGAA-TTGAAACCAG 12407 |||||| ||||| |||| || || || | |||| || ||||| ||| || | Sbjct 7455 AGGTTCAGCTGGCTTAGATTTGCGTGCATGTATAGATGAAGCAATTGAAATTGCTACG-G 7397 Query 12408 GTGAAACCAAGTTAATTGAAACTGGTTTGGCTATTCATCTGGACGATGTACATGTAGCTG 12467 ||||||| ||| | |||| || ||||| ||| | | || ||| | | | || | Sbjct 7396 GTGAAACGGTTTTAGTCAAAACAGGCTTGGCAATTTACATCGAAGATCCAAACTTTGCGG 7337 Query 12468 CAATGATTCTTCCTCGTTCAGGTCTAGGCCATAAACATGGTGTAGTGCTTGGGAACCTTA 12527 | | ||| | || ||||| ||||| || |||||||||||| | || ||||| | ||| Sbjct 7336 GATTAATTTTACCACGTTCGGGTCTTGGGCATAAACATGGTATTGTA-TTGGGTAATTTA 7278 Query 12528 CT-GGTCTGATTGATTCAGATTATCAGGGTGAACTTATGGT 12567 | ||| ||||||||||||| || || || ||||| ||||| Sbjct 7277 GTCGGTTTGATTGATTCAGACTACCAAGGCGAACTGATGGT 7237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231027401944580