Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq5373 122 2e-23 >seq5373 Length=95907 Score = 122 bits (134), Expect = 2e-23 Identities = 215/301 (71%), Gaps = 13/301 (4%) Strand=Plus/Minus Query 4647 TCGGT-CGAAACGGCGACTATGAGAACCTCGACGCGCTGGTGATGGATGCGACCAATAAC 4705 ||||| ||| | ||||| ||| | || |||| || |||| |||||| |||||| | Sbjct 55805 TCGGTGCGACA-GGCGATTATCATAATGTCGATGCATTGGTAATGGATTTAACCAATGAA 55747 Query 4706 CTGATTGACGAGGTTTATCAGGATGACCCGAAACTCGTTG--CCATCGT--TGGCCGTAA 4761 ||||||| ||||| | ||||| | || | | |||| | || || | | |||| Sbjct 55746 ATGATTGATGAGGTACACCAGGACAATCCTGATTTGGTTGTACTAT-GTAATCGTCGTA- 55689 Query 4762 GCTGCTGGCCGACAAATATTTCCCGCTGGTGAACAAGCCGCAGGAAAACAGCGAGGCGCT 4821 ||| | | |||||||||||||| ||||| ||||| ||| || |||||||| || Sbjct 55688 -CTGTTT-CTGACAAATATTTCCCACTGGTAAACAAAGAGCAAGAGAACAGCGAAAAACT 55631 Query 4822 CGCGGCAGATATCATCATCAGCCAGAAGCGAATCGGCAACCTGCCTG-CTGTGCGTGTGC 4880 | |||||||| || |||||||| || || || ||||| | |||| || ||| ||||| Sbjct 55630 TTCTGCAGATATTATTATCAGCCAAAAACGCATGGGCAATTTACCTGTCTATGC-TGTGC 55572 Query 4881 CGTACTTCCCGGCGAATGCCGTGTTAGTGACCACGCTGGAAAACCTCTCTATCTAT-TTC 4939 ||| |||||| | ||||| | || ||||| || | || ||||| || |||||| ||| Sbjct 55571 CGTTCTTCCCAGAAAATGCAATCTTGGTGACAACATTTGACAACCTTTCAATCTATGTTC 55512 Query 4940 A 4940 | Sbjct 55511 A 55511 Score = 113 bits (124), Expect = 9e-21 Identities = 301/453 (66%), Gaps = 13/453 (3%) Strand=Plus/Minus Query 14850 GACGGTTTCCGTTTCTGGGGTAACCGCACCTGCTCAGATGACCCGCTTTTTCTGTTTGAG 14909 || || |||||||| |||||| || || || || | ||| || | ||| ||||| Sbjct 44903 GATGGCTTCCGTTTTTGGGGTTCACGTACTTGTTCTGCTGATCCTTTATTTGCATTTGAA 44844 Query 14910 AACTACACCCGTACCGCGCAGGTACTGGCCGACACGATGGCTGAAGCGCACATGTGGGCG 14969 |||| || ||||| || || || || | |||||||||||||||| || |||||||| Sbjct 44843 AACTCAACTCGTACAGCTCAAGTTTTGTCGGACACGATGGCTGAAGGTCATATGTGGGCA 44784 Query 14970 GTCGATAAGCCCATTACCGCCACGCTCATTCG----TGACATTGTTGACGGCATCAATGC 15025 || ||||| || || | ||| || || | ||||| || || ||||| ||||| Sbjct 44783 GTTGATAA-ACCTTTGCACCCA---TCTTTGGCGAAAGACATCGTAGAGGGCATTAATGC 44728 Query 15026 CAAATTCCGCGAGCTGAAAACAAACGGCTACATCGTGGACGGTGAATGCTGGTTCGA-CG 15084 ||||||||| || || || | || |||||| | || ||| | || |||||||| | Sbjct 44727 CAAATTCCGTGATCTTCGTACCCAAGGGTACATCATCGATGGTCAGTGTTGGTTCGATCC 44668 Query 15085 AGGAATCGAACGACAAGGAAACCCTGAAAGCCGGGAAACTGTATATCGACTACGACTATA 15144 || | || ||| ||| || | | ||||| || | | | || || |||| || Sbjct 44667 AGCATTC-AACAGCAAAGAGTCATTAAAAGCTGGTCGTTTATTGCTTGATTATGACTTTA 44609 Query 15145 CGCCGGTTCCGCCACTGGAGAGCCTGACCCTGCGCCAGCGTATCACCGATAAATATCTGG 15204 | || || || ||||| || || ||| | | || |||||||| || |||||| | Sbjct 44608 CCCCTGTGCCCCCACTTGAAGATCTCACCTTACAGCAACGTATCACAGACCGATATCTCG 44549 Query 15205 TGAATCTGGCCGAATCGGTCAACAGCTAAG--GAGCCTGAAATAACATGGCACTACCCCG 15262 || | ||| | || || ||| || | |||| |||||||| |||| Sbjct 44548 CTGATTTCGCCTCA-CGTATGACTGCTTAGATATACAGGAAAGAACATGGCTTTACCTAA 44490 Query 15263 TAAACTCAAATATCTGAATATGTTCAACGATGG 15295 |||||||||| || || |||| ||||| || Sbjct 44489 GAAACTCAAATTAATGGATCTGTTTAACGAAGG 44457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94849358254528