Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq128 95.1 6e-15 seq3662 89.7 2e-13 >seq128 Length=380166 Score = 95.1 bits (104), Expect = 6e-15 Identities = 206/306 (67%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 7964 CAGGTGAAACCAAGTTAGTTGAAACTGGTTTGGCTATTCATCTGGATGATGTGAAGTATG 8023 |||||||||| || ||| |||||||||| || ||| || | || ||| || | || Sbjct 373898 CAGGTGAAACGGTTTTGGTTAAAACTGGTTTAGCAATTTATATTGAAGATCCAAATTTTG 373839 Query 8024 CAGCAATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTGCTTGGGAACC 8083 | | | ||| | ||||| |||||||| || ||||| |||||| | ||| | || ||| Sbjct 373838 CTGGTTTAATTTTACCTCGCTCAGGTCTTGGTCATAAACATGGTATTGTGTTAGGTAACT 373779 Query 8084 TTACTGGTCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGCT 8143 | ||| | ||||| || || ||||| || || |||||||| | |||||||| | Sbjct 373778 TGGTCGGTTTAATTGACTCTGATTATCAAGGAGAGCTTATGGTTTCTGTTTGGAATCG-T 373720 Query 8144 CTACAGAGCCTTTTACTGTTA-ACCCTGGTGACCGTATTGCTCAGATGGTAATCGTGCCT 8202 || | || | ||| | || ||||| ||| | || || ||| |||| ||| Sbjct 373719 GGGCAAAATACCTTCCGTTTAGAACCAGGTGAGCGTTTGGCACAATATGTACTCGTTCCT 373660 Query 8203 GTAATGCAGCCTGAGTTCGTTGTAGTGGATTCATTTGAGTCTACCAAACGAGGTGCTGGT 8262 ||| | || ||||||| | |||| || |||| | || | || ||||||||| Sbjct 373659 GTAGTACAAGCTGAGTTTGAACAAGTGAATGAGTTTGTTGCGACTGAGCGTGGTGCTGGT 373600 Query 8263 GGCTTT 8268 || ||| Sbjct 373599 GGTTTT 373594 >seq3662 Length=120183 Score = 89.7 bits (98), Expect = 2e-13 Identities = 134/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 7944 TGAACCATTTGAA-TTGAAACCAGGTGAAACCAAGTTAGTTGAAACTGGTTTGGCTATTC 8002 |||| || ||||| ||| || |||||||| ||||| |||| || ||||| ||| Sbjct 7419 TGAAGCAATTGAAATTGCTACG-GGTGAAACGGTTTTAGTCAAAACAGGCTTGGCAATTT 7361 Query 8003 ATCTGGATGATGTGAAGTATGCAGCAATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGC 8062 | | || ||| || | ||| | | | ||| | || ||||| ||||| || ||||| | Sbjct 7360 ACATCGAAGATCCAAACTTTGCGGGATTAATTTTACCACGTTCGGGTCTTGGGCATAAAC 7301 Query 8063 ATGGTGTAGTGCTTGGGAACCTTACT-GGTCTGATTGATTCAGACTATCAGGGTGAACTT 8121 ||||| | || ||||| | ||| | ||| |||||||||||||||| || || ||||| Sbjct 7300 ATGGTATTGTA-TTGGGTAATTTAGTCGGTTTGATTGATTCAGACTACCAAGGCGAACTG 7242 Query 8122 ATGGT 8126 ||||| Sbjct 7241 ATGGT 7237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230082282588964