Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2234 158 1e-33 seq32926 141 8e-29 seq8748 100 3e-16 seq76486 93.3 4e-14 seq18050 84.2 2e-11 >seq2234 Length=154088 Score = 158 bits (174), Expect = 1e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 || ||||| ||||| || ||||| || ||| || || | |||| || ||| |||| Sbjct 13265 GGAAAAACAATTACACTAGAAGTCGAGCCCAGTGATACTATTGAAAACGTTAAAGCAAAG 13324 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||||||||| ||||||||||| || |||||||||||| | |||||||| || |||||| Sbjct 13325 ATCCAAGACAAGGAAGGAATACCACCAGATCAACAACGTCTCATCTTTGCTGGTAAACAG 13384 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 |||| ||| |||| | |||| || ||||| ||||| ||||| || || ||||||||| Sbjct 13385 TTGGAAGATGGAAGAACCCTGTCTGACTATAATATTCAGAAGGAGTCTACTCTACACTTG 13444 Query 24911 GTGTTGCGATTGCGCGGAGG 24930 || ||| || | || || || Sbjct 13445 GTTTTGAGACTTCGTGGTGG 13464 Score = 145 bits (160), Expect = 7e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || ||||| || || || || || || || || | | Sbjct 10510 ATGCAGATTTTTGTGAAAACTCTCACCGGCAAGACCATCACTCTAGAGGTTGAGCCTAGT 10569 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| || |||||||||||||| ||||| |||||| Sbjct 10570 GATACCATTGAAAATGTAAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAA 10629 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||||||| || ||||| |||| ||| |||| | | || || || ||| Sbjct 10630 CAACGATTGATCTTTGCTGGAAAACAATTGGAAGATGGAAGAACCCTCTCGGACTACAAC 10689 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 |||||||||||||| ||||| || Sbjct 10690 ATTCAAAAGGAATCCACACTTCA 10712 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| || || || || || ||||| || ||||| || | | Sbjct 11650 ATGCAAATCTTCGTCAAAACTCTTACTGGGAAGACAATTACACTAGAAGTTGAGCCAAGT 11709 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| || || ||||| || ||||| || ||||| |||||| Sbjct 11710 GATACAATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATCCCTCCTGATCAA 11769 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| || |||||||| || || ||||| || ||| | | |||| || || ||| Sbjct 11770 CAACGATTAATCTTTGCGGGCAAGCAGCTAGAAGATGGACGTACTCTGTCGGACTACAAC 11829 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || ||||||||||| || || |||||||| ||| || | | |||||| Sbjct 11830 ATCCAAAAGGAATCAACCCTTCACTTGGTCTTGAGACTAAGAGGAGGC 11877 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || ||||| |||||||| ||||| | ||||| ||| | | Sbjct 11878 ATGCAAATTTTTGTAAAGACTCTAACAGGTAAAACAATTACATTAGAAGTCGAACCAAGT 11937 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||| ||||| |||||||||||||| || || ||||| Sbjct 11938 GATACCATTGAAAATGTTAAAGCAAAAATCCAGGACAAAGAAGGAATTCCCCCAGATCAG 11997 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||| || ||||| || || || || || ||| | | |||| ||||||||| Sbjct 11998 CAGCGTTTAATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCGGATTATAAC 12057 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||| ||||| || || || |||| || || | | |||||| Sbjct 12058 ATTCAAAAAGAATCTACTCTGCATCTGGTTTTAAGACTCAGAGGAGGC 12105 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| || || || ||||| || || | ||||| ||| | | Sbjct 12646 ATGCAAATTTTTGTTAAAACCCTGACTGGCAAAACCATCACCTTAGAAGTTGAACCTAGT 12705 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || ||| || ||||| || |||||||| || || || ||||| Sbjct 12706 GATACAATTGAGAATGTGAAAGCCAAAATCCAGGATAAAGAAGGTATTCCCCCAGATCAG 12765 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || |||||||| || ||||| || || ||| |||| ||||||||||||| Sbjct 12766 CAGAGGTTAATCTTTGCTGGTAAACAACTTGAAGATGGCAGAACTTTGTCAGATTATAAT 12825 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || |||||||| || ||||||||||| | | ||| | |||||| Sbjct 12826 ATCCAGAAGGAATCTACTCTACACTTGGTTCTCAGGTTGAGAGGAGGC 12873 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| ||||| || ||||| || || | |||||||| | | Sbjct 11422 ATGCAAATTTTCGTGAAAACCCTAACTGGCAAAACCATCACCTTGGAAGTAGAGCCTAGT 11481 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||||| || ||| || || |||||||||||||| || || || |||||| Sbjct 11482 GACACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAAGAAGGTATCCCCCCAGATCAA 11541 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || || ||| |||| ||| | | | || ||||| ||| Sbjct 11542 CAGAGGCTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACTCTTTCTGATTACAAC 11601 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| ||||| ||| |||| || || || | ||| | ||||| Sbjct 11602 ATCCAAAAAGAATCTACATTACATTTAGTTCTGAGGTTGAGAGGAGG 11648 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || ||||| || || || ||||| || | | Sbjct 10738 ATGCAGATCTTTGTGAAGACTCTGACTGGAAAAACCATCACTCTTGAAGTGGAGCCTAGT 10797 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || ||||| ||||| ||||| || || || || ||||| Sbjct 10798 GACACAATCGAAAATGTGAAGGCCAAGATTCAAGATAAAGAGGGTATCCCACCAGATCAG 10857 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || ||||| || ||| | | | |||||||| || Sbjct 10858 CAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGTACTCTTTCAGATTACAAT 10917 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| ||||| || || ||| |||| | ||| || | ||||| Sbjct 10918 ATCCAAAAAGAATCCACTCTTCACCTGGTTCTCCGACTGAGAGGAGG 10964 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 |||||||| ||||| || ||||| ||| | | || || | || | || ||| || Sbjct 12445 GGTAAAACCATTACTCTTGAAGTTGAACCAAGTGATACCATTGAGAATGTGAAAGCTAAA 12504 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 || ||||| |||||||| || ||||| ||||| || | || ||||| || || ||||| Sbjct 12505 ATTCAAGATAAAGAAGGTATTCCTCCAGATCAGCAGAGGTTAATCTTCGCAGGTAAACAA 12564 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 || || ||| ||| | | || || ||||||||||| || ||||| || || || | Sbjct 12565 CTTGAAGATGGCCGAACCCTATCGGACTATAACATTCAGAAAGAATCAACTCTGCATCTA 12624 Query 24911 GTGTTGCGATTGCGCGGAGGC 24931 || ||| | | || |||||| Sbjct 12625 GTCTTGAGGCTCCGAGGAGGC 12645 >seq32926 Length=14205 Score = 141 bits (156), Expect = 8e-29 Identities = 167/227 (74%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| ||||| || ||||| ||||| || ||||| || ||| Sbjct 14113 ATGCAGATATTCGTCAAAACTCTAACAGGAAAAACAATTACACTAGAAGTCGAGCCCAGT 14054 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | | |||| || ||| ||||||||||||||| ||||||||||| || |||||| Sbjct 14053 GATGCTATTGAAAACGTTAAAGCAAAGATCCAAGACAAGGAAGGAATACCACCAGATCAA 13994 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| | | |||| ||| |||| | |||| || ||||| Sbjct 13993 CAACGTCTCATTTTTGCTG-------GTTGGAAGATGGAAGAACCCTGTCTGACTATAAT 13941 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || |||||||||| ||| || | || || || Sbjct 13940 ATTCAGAAGGAGTCTACTGTACACTTGGTTTTGAGACTTCGTGGTGG 13894 >seq8748 Length=68017 Score = 100 bits (110), Expect = 3e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 ||||| |||||||| | ||||||||| ||||||| || || || ||||| | |||||| Sbjct 32991 TATTCAACAATTTCTGTACACAAATTGCTACACTGAATTGTTCCCAAATTCTTTTGATTT 33050 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242 ||| | ||||||||||| ||||| | ||| || ||||| || ||||| ||||| | Sbjct 33051 GATTTCCTATTACAAGCATCCTTGTATAACATGTAAGGTGTTCCGGTTTCAACTTGCGAT 33110 Query 139243 TCTATAAT 139250 || ||||| Sbjct 33111 TCAATAAT 33118 >seq76486 Length=4962 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 126046 GTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttATAAAGACAAAGGGT 126105 |||||||| | |||||||| ||| |||||||| ||||||| |||||| | ||| Sbjct 110 GTGGAAGGAATCTTTTTCTCTGGTTCCTTTGCGGCCATTTTTTGGTTAAAGAAACGGGGA 169 Query 126106 ATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACGAAGGA 126156 ||||||| || ||||||| ||||||||||||||| ||| || |||||| Sbjct 170 TTAATGCCTGGATTAACGTTTAGCAACGAGTTGATTAGTCGAGATGAAGGA 220 >seq18050 Length=32055 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 126046 GTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttATAAAGACAAAGGGT 126105 |||||||| | ||||||| ||| |||||||| ||||||| |||||| | ||| Sbjct 12001 GTGGAAGGAATCCTTTTCTCAGGTTCCTTTGCGGCCATTTTTTGGTTAAAGAAACGGGGA 11942 Query 126106 ATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACGAAGGACTCCATACG 126165 ||||||| | ||||||| ||||||||||||||| ||| || ||||| || || Sbjct 11941 TTAATGCCTTGATTAACGTTTAGCAACGAGTTGATTAGTCGAGATGAAGGGCTACACTGC 11882 Query 126166 GACTTTGCATGTCTGTATTACAATAATTA 126194 || ||| | |||| | | |||| |||| Sbjct 11881 GATTTTTCCTGTCACTTGTTCAATCATTA 11853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448884003202080