Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022058.1 Length=52519 Score E Sequences producing significant alignments: (Bits) Value seq30225 104 8e-18 >seq30225 Length=16661 Score = 104 bits (114), Expect = 8e-18 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42892 CTTGCGGATCGTCGGCAGGACGACCGCCGTGACCCACTTCTTGAAGGCTTTCGCCTCGGG 42951 ||||||||| | ||||| || | || || |||||||||||||||||||| ||||| || Sbjct 3012 CTTGCGGATGGCCGGCAAAACCTCAGCAGTCACCCACTTCTTGAAGGCTTTTGCCTCTGG 2953 Query 42952 CTTGCGGCTGCGGAGGATGAGCGAGTAGAGCCCAGACTCGTTTACGGTGCGAAGCTGCTG 43011 |||||||||||| ||||| ||||| || ||||||||||| | | | | ||| Sbjct 2952 CTTGCGGCTGCGAAGGATCGCGGAGTAAAGACCAGACTCGTTGATAACCAGCATTTCCTG 2893 Query 43012 GTCACCGCCAGGGGTCGCCAACTTGGCGA-ACCCTTTGTCGTCGTCGTC 43059 | | || ||| ||||| ||| || || ||||||| ||||| || || Sbjct 2892 GGCGCCACCAAGGGTCTCCACAATGTGGAGACCCTTT-TCGTCATCATC 2845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167579759310392