Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq4054 183 5e-41 seq13922 168 1e-36 seq111569 114 2e-20 seq26979 114 2e-20 seq152 102 1e-16 seq155771 98.7 2e-15 seq57648 98.7 2e-15 seq10625 96.9 6e-15 seq32994 95.1 2e-14 seq520 95.1 2e-14 seq98207 84.2 4e-11 >seq4054 Length=113499 Score = 183 bits (202), Expect = 5e-41 Identities = 200/266 (75%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 35454 GTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCC 35513 |||||||| ||||| || || |||||||| || ||||| || || || |||| || | Sbjct 32994 GTCACACCTGTCTGACCTTGATATTTACCACCACGATCTTTATATGATGTTTCACATACT 33053 Query 35514 TCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGC 35573 || || || || || || ||||| || || ||||| || ||| || | |||||| || Sbjct 33054 TCATCGCTTTCAAAGAAAAGCATTTGTGCGACACCCTCACCCGCATAGATACGCGCAGGT 33113 Query 35574 AGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGC 35633 ||||| ||||| ||| || || | ||| || ||||||||||||||||| || | |||| Sbjct 33114 AGGTTTGTAGTATTGGAAAATTCTAAAGTAACGTGACCTTCCCACTCAGGCTCTAACGGC 33173 Query 35634 GTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGG 35693 ||||| || || || ||||| || ||||| || || |||||||||||| || || Sbjct 33174 GTCACATTTACAATAATACCGCAACGCGCATAAGTCGACTTACCCAAACAAACGGTAAGT 33233 Query 35694 ACGTTGCGCGGAATGCGGAAGTATTC 35719 || || |||||||| ||||||||||| Sbjct 33234 ACATTTCGCGGAATACGGAAGTATTC 33259 >seq13922 Length=43809 Score = 168 bits (186), Expect = 1e-36 Identities = 219/303 (72%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 35453 GGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTC 35512 ||||||||| || || || ||||| ||||| || ||||| || || || |||| || | Sbjct 12373 GGTCACACCTGTTTGACCTTGGTACTTACCACCACGATCTTTATATGATGTTTCACACAC 12432 Query 35513 CTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGG 35572 ||| || || || || || ||||| || || |||||||| ||||| | ||| ||||| Sbjct 12433 CTCATCGCTTTCAAAGAAAAGCATTTGTGCGACACCTTCACCTGCGTAAATACGTGCCGG 12492 Query 35573 CAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGG 35632 | || || ||||| ||||| || || || |||||||||||||| ||||| | || Sbjct 12493 TAAATTTGTTGTGTTTGAAAACTCAAGCGTTACGTGACCTTCCCACTCTGGTTCTAAAGG 12552 Query 35633 CGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAG 35692 ||| || || || || || || || ||||| ||||| ||||| ||||| || | Sbjct 12553 CGTTACATTTACAATAATGCCGCAACGCGCATAGGTTGATTTACCTAAACAAACAGTTAA 12612 Query 35693 GACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGG 35752 || ||||| || || ||||||||||||| || || || ||||| || ||| || || Sbjct 12613 AACATTGCGTGGGATACGGAAGTATTCGATTGTACGCGCAAGAGCAAATGAGTTTGGTGG 12672 Query 35753 AAT 35755 ||| Sbjct 12673 AAT 12675 >seq111569 Length=1657 Score = 114 bits (126), Expect = 2e-20 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 247006 CCAGACGTGCGATGATTTCGGAGTTCATGCTGCGATGGTGCGTACGGGCAACGTCCGCGA 247065 ||||||| ||||||||||| |||||||||||||| || || | || || ||||| |||| Sbjct 850 CCAGACGGGCGATGATTTCAGAGTTCATGCTGCGGTGATGGTTGCGTGCTACGTCAGCGA 909 Query 247066 TGCGTTCGCGCATGCCATCCGGCAAACGCACGACAAACTTGTCGGCGCTGCGGCTG 247121 | || || ||||||||||| ||||| || ||||| || ||||| || |||||||| Sbjct 910 TACGCTCACGCATGCCATCTGGCAAGCGAACGACGAATTTGTCAGCCGTGCGGCTG 965 >seq26979 Length=17813 Score = 114 bits (126), Expect = 2e-20 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 73 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGGGTTCGACT 14 Query 120288 CCTGATGCCGGCA 120300 |||| |||||||| Sbjct 13 CCTGGTGCCGGCA 1 >seq152 Length=367798 Score = 102 bits (112), Expect = 1e-16 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 120226 TTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGA 120285 ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 249139 TTGCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCACAGTTCGA 249080 Query 120286 -TCCCTGATGCCGGCACCATATTCT 120309 ||| || |||||||||||| |||| Sbjct 249079 ATCCGTG-TGCCGGCACCATTTTCT 249056 >seq155771 Length=1128 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 247003 GTGCCAGACGTGCGATGATTTCGGAGTTCATGCTGCGATGGTGCGTACGGGCAACGTCCG 247062 || |||| || ||||| || || ||||||||||||||||| || | || || || || | Sbjct 145 GTTCCAGGCGAGCGATAATCTCCGAGTTCATGCTGCGATGATGGTTGCGCGCGACATCGG 86 Query 247063 CGATGCGTTCGCGCATGCCATCCGGCAAACGCACGACAAACTTGTCGGCGCTGCGGCTG 247121 |||||| |||||||| || || |||| || || ||||| |||||||| |||||||| Sbjct 85 AGATGCGCTCGCGCATCCCGTCGGGCAGGCGTACAACAAATTTGTCGGCTGTGCGGCTG 27 >seq57648 Length=6294 Score = 98.7 bits (108), Expect = 2e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| Sbjct 251 GCCGGTATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCGTGAGTTCGAGT 192 Query 120288 CCTGATGCCGGCACCAT 120304 || |||||||||||| Sbjct 191 CCCACTGCCGGCACCAT 175 >seq10625 Length=57339 Score = 96.9 bits (106), Expect = 6e-15 Identities = 71/80 (89%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 120226 TTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCG- 120284 ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 5747 TTGCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCACAGTTCGA 5806 Query 120285 ATCCCTGATGCCGGCACCAT 120304 |||| || |||||||||||| Sbjct 5807 ATCCGTG-TGCCGGCACCAT 5825 >seq32994 Length=14149 Score = 95.1 bits (104), Expect = 2e-14 Identities = 71/81 (88%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGA-T 120286 ||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 95 GCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCACAGTTCGAAT 36 Query 120287 CCCTGATGCCGGCACCATATT 120307 || || |||||||||||| || Sbjct 35 CCGTG-TGCCGGCACCATCTT 16 >seq520 Length=264922 Score = 95.1 bits (104), Expect = 2e-14 Identities = 71/81 (88%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCG-AT 120286 ||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct 94634 GCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCACAGTTCGAAT 94693 Query 120287 CCCTGATGCCGGCACCATATT 120307 || || |||||||||||| || Sbjct 94694 CCGTG-TGCCGGCACCATCTT 94713 >seq98207 Length=2386 Score = 84.2 bits (92), Expect = 4e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 122605 CGGGTCGTTAGCTCAGTTGGTAGAGCATGGCGCTTTTAACGCCGTGGTCGTTGGTTCGAG 122664 |||||| |||||||||||||||||||| | ||||||| | |||||| |||||| || Sbjct 327 CGGGTCATTAGCTCAGTTGGTAGAGCAGTGGACTTTTAATCCATTGGTCGATGGTTCAAG 268 Query 122665 TCCAACACGACCCACCAGTTTCATAG 122690 |||| || ||||||||| | || ||| Sbjct 267 TCCATCATGACCCACCATTCTCTTAG 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 824056050745440