Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022744.1 Length=39860 Score E Sequences producing significant alignments: (Bits) Value seq34826 107 5e-19 >seq34826 Length=13225 Score = 107 bits (118), Expect = 5e-19 Identities = 132/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 31888 GAGAACAACTCATTCCTTGAAGCCCGTAACCTGTTTGACTCTGACATGCCAGTCACCCTA 31947 ||||||||| | ||| ||||| |||||||| || ||||| || ||| | ||||| Sbjct 5818 GAGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCG 5759 Query 31948 CCTAATGGACAGCCATTCTCTGTGAATGACCTACGTGACTTCGATATGAAGCATGTAATG 32007 ||| | || ||||| ||| ||||||||||||| || |||||| | || | || | Sbjct 5758 CCTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGT- 5700 Query 32008 CCAGCA-TATGACCGCCGTGTTGATGGTGACATTGCTATCATGGGTGGCACAGGGAAG 32064 || ||| || |||||| | || | |||||||| || ||||||||||||| |||||| Sbjct 5699 CCCGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAG 5642 Score = 82.4 bits (90), Expect = 2e-11 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 29755 CCAACAGGGCCGCGAGGTGTCATGCAGTTCACTAAGGCAACTGGTCAGGCTTATGGTCTC 29814 || || ||||| || ||| || ||||||||| ||||| ||||| | || || || || Sbjct 8011 CCTACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCCTACGGCCTG 7952 Query 29815 CAGAACGATGAGGACTTCACTGACCCGGCTAAGTCCATTGATGCAGGTGCTCGTTACCT- 29873 | ||| ||||||||| ||||| || |||||||| || |||| ||||| || | Sbjct 7951 ATCACCGAGGAGGACTTCTTCGACCCCGCCAAGTCCATCGACGCAGCCGCTCGGCACATG 7892 Query 29874 CGCAGACCTCGTTAAGAAGTACGATGGCGATGAACTTAAAGCTGCCCTAGCGTACAACCA 29933 ||| ||| | | ||| || | | ||||| || || || || ||| ||||||||| Sbjct 7891 CGC-GACAACCTCAAGGCGTCCAACGGCGACGAGCTGAAGGCGCTCCTGATGTACAACCA 7833 Query 29934 AGGTGAAGGACGCAATGGTAAGCCA-CAACTGGAAGCCTACGA 29975 ||| | || | | ||| || | || || ||||||||||| Sbjct 7832 AGGGGCTGG-CCCGGTGGGCCGCAAGCAGCTCGAAGCCTACGA 7791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127157660396304