Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq141806 239 1e-58 seq37929 239 1e-58 seq21609 172 1e-38 seq106656 134 3e-27 seq11269 114 3e-21 >seq141806 Length=1231 Score = 239 bits (264), Expect = 1e-58 Identities = 395/560 (71%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 18571 TGAATCGCCACAGATAATCTAGACACT-TCCGAGCCGCTGATAATATTGGTTTTCGTATT 18629 ||||||||| ||| | ||||||||| ||| ||| |||| |||| | ||||| || | Sbjct 1231 TGAATCGCCCCAGGTTTCCTAGACACTCTCCAAGCT-CTGAAAATAGCGCTTTTCATACT 1173 Query 18630 CAGTTGGTGGCATATG-ATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCG 18688 | ||| | | || || | | | ||||| ||||| |||||||||||| ||| Sbjct 1172 CCACTGGCGATAGCTGCATAGCGCTG-CTGTGCCGGCGCTTGGGGTTATAAAACATCTCG 1114 Query 18689 ATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTT--TA 18746 ||||||||||| | ||||| |||||||||||| || || | |||| |||| | | | Sbjct 1113 ATGTAATCAAACACATCACTGCGAGCTTCTTCGCGGGTGCTGTAG--GTTTTCCGTCGGA 1056 Query 18747 TCCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTAC 18806 | || || || ||||||| ||||||||| || || ||||| |||||||| || ||||| | Sbjct 1055 TGCGCTCCCGCTTCAGTAACTGGAAAAAGCTCTCCGCGACCGCGTTGTCGTGGCAGTTGC 996 Query 18807 CGCGACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGC 18866 |||| || |||||||||| ||| || | || ||||| ||||| || ||| Sbjct 995 CGCGTCGACTCATACTGCTGATCAGATTGTTGGCCTTGAGGAAACTTTGCCAGTCCGAGC 936 Query 18867 TTGTGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCC 18926 | || |||| ||||| ||||| || || | || ||| | || || || || |||| Sbjct 935 TGCTGAACTGGCTGCCCTGATCGGAGTGGATCATCACTTCCTGCCTGGGCTTGCGCCGCC 876 Query 18927 ACACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACC 18986 | || |||||||| | |||| | | | | || | |||||| |||| ||| |||| Sbjct 875 AGACCGCCATCAGCAACGCATCGATGGCCAGGTCGCTGCACATCCGTGGCTTCATCGACC 816 Query 18987 AGCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGT 19046 | || || || | ||| || ||||| || | |||||| || | ||||| ||| || || | Sbjct 815 AACCGATCACCTGGCGTGAAAACAGATCCAGAACCACCGCTAAATACAACCAACCCTCAT 756 Query 19047 GAGTCCGGATGTAGGTGATGTCCGTTACCCAACGCTCATCCGGTGCTTCCGA-GTTGAAC 19105 || |||||||| |||||||| || ||||| || | ||| | | || |||||| Sbjct 755 AGGTGCGGATGTAAGTGATGTCGGTGACCCAGACCTTGTTCGGCTC-GCTGACATTGAAC 697 Query 19106 TGCCGCTGGAGCCTGTTGGG 19125 ||||||| |||| ||||| Sbjct 696 TGCCGCTCCAGCCGATTGGG 677 >seq37929 Length=11562 Score = 239 bits (264), Expect = 1e-58 Identities = 395/560 (71%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 18571 TGAATCGCCACAGATAATCTAGACACT-TCCGAGCCGCTGATAATATTGGTTTTCGTATT 18629 ||||||||| ||| | ||||||||| ||| ||| |||| |||| | ||||| || | Sbjct 5650 TGAATCGCCCCAGGTTTCCTAGACACTCTCCAAGCT-CTGAAAATAGCGCTTTTCATACT 5592 Query 18630 CAGTTGGTGGCATATG-ATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCG 18688 | ||| | | || || | | | ||||| ||||| |||||||||||| ||| Sbjct 5591 CCACTGGCGATAGCTGCATAGCGCTG-CTGTGCCGGCGCTTGGGGTTATAAAACATCTCG 5533 Query 18689 ATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTT--TA 18746 ||||||||||| | ||||| |||||||||||| || || | |||| |||| | | | Sbjct 5532 ATGTAATCAAACACATCACTGCGAGCTTCTTCGCGGGTGCTGTAG--GTTTTCCGTCGGA 5475 Query 18747 TCCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTAC 18806 | || || || ||||||| ||||||||| || || ||||| |||||||| || ||||| | Sbjct 5474 TGCGCTCCCGCTTCAGTAACTGGAAAAAGCTCTCCGCGACCGCGTTGTCGTGGCAGTTGC 5415 Query 18807 CGCGACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGC 18866 |||| || |||||||||| ||| || | || ||||| ||||| || ||| Sbjct 5414 CGCGTCGACTCATACTGCTGATCAGATTGTTGGCCTTGAGGAAACTTTGCCAGTCCGAGC 5355 Query 18867 TTGTGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCC 18926 | || |||| ||||| ||||| || || | || ||| | || || || || |||| Sbjct 5354 TGCTGAACTGGCTGCCCTGATCGGAGTGGATCATCACTTCCTGCCTGGGCTTGCGCCGCC 5295 Query 18927 ACACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACC 18986 | || |||||||| | |||| | | | | || | |||||| |||| ||| |||| Sbjct 5294 AGACCGCCATCAGCAACGCATCGATGGCCAGGTCGCTGCACATCCGTGGCTTCATCGACC 5235 Query 18987 AGCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGT 19046 | || || || | ||| || ||||| || | |||||| || | ||||| ||| || || | Sbjct 5234 AACCGATCACCTGGCGTGAAAACAGATCCAGAACCACCGCTAAATACAACCAACCCTCAT 5175 Query 19047 GAGTCCGGATGTAGGTGATGTCCGTTACCCAACGCTCATCCGGTGCTTCCGA-GTTGAAC 19105 || |||||||| |||||||| || ||||| || | ||| | | || |||||| Sbjct 5174 AGGTGCGGATGTAAGTGATGTCGGTGACCCAGACCTTGTTCGGCTC-GCTGACATTGAAC 5116 Query 19106 TGCCGCTGGAGCCTGTTGGG 19125 ||||||| |||| ||||| Sbjct 5115 TGCCGCTCCAGCCGATTGGG 5096 >seq21609 Length=24809 Score = 172 bits (190), Expect = 1e-38 Identities = 271/381 (71%), Gaps = 8/381 (2%) Strand=Plus/Minus Query 18571 TGAATCGCCACAGATAATCTAGACACT-TCCGAGCCGCTGATAATATTGGTTTTCGTATT 18629 ||||||||| ||| | ||||||||| ||| ||| |||| |||| | ||||| || | Sbjct 20294 TGAATCGCCCCAGGTTTCCTAGACACTCTCCAAGCT-CTGAAAATAGCGCTTTTCATACT 20236 Query 18630 CAGTTGGTGGCATATG-ATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCG 18688 | ||| | | || || | | | ||||| ||||| |||||||||||| ||| Sbjct 20235 CCACTGGCGATAGCTGCATAGCGCTG-CTGTGCCGGCGCTTGGGGTTATAAAACATCTCG 20177 Query 18689 ATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTT--TA 18746 ||||||||||| | ||||| |||||||||||| || || | |||| |||| | | | Sbjct 20176 ATGTAATCAAACACATCACTGCGAGCTTCTTCGCGGGTGCTGTAG--GTTTTCCGTCGGA 20119 Query 18747 TCCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTAC 18806 | || || || ||||||| ||||||||| || || ||||| |||||||| || ||||| | Sbjct 20118 TGCGCTCCCGCTTCAGTAACTGGAAAAAGCTCTCCGCGACCGCGTTGTCGTGGCAGTTGC 20059 Query 18807 CGCGACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGC 18866 |||| || |||||||||| ||| || | || ||||| ||||| || ||| Sbjct 20058 CGCGTCGACTCATACTGCTGATCAGATTGTTGGCCTTGAGGAAACTTTGCCAGTCCGAGC 19999 Query 18867 TTGTGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCC 18926 | || |||| ||||| ||||| || || | || ||| | || || || || |||| Sbjct 19998 TGCTGAACTGGCTGCCCTGATCGGAGTGGATCATCACTTCCTGCCTGGGCTTGCGCCGCC 19939 Query 18927 ACACGGCCATCAGAAGTGCAT 18947 | || |||||||| | |||| Sbjct 19938 AGACCGCCATCAGCAACGCAT 19918 >seq106656 Length=1810 Score = 134 bits (148), Expect = 3e-27 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 18654 AACCATGCCGACGCTTACTGTTATAAAACATTTCGATGTAATCAAAAATATCACCGCGAG 18713 |||| || || || || ||| |||||||| |||||||| || || | ||| |||||| Sbjct 27 AACCGTGTCGGCGTTTTGGGTTGTAAAACATCTCGATGTAGTCGAACACGTCAGCGCGAG 86 Query 18714 CTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTATCCGTTCACGTTTCAGTAGCTGGAAAA 18773 | || | | || | |||||||||| | | |||||||| || ||||| || ||||||| Sbjct 87 CATCCTGCCTAGTGCTGTAGATCTTTCGCCTAATCCGTTCCCGCTTCAGCAGTTGGAAAA 146 Query 18774 AACTTTCTGCGACTGCGTTGTCATGACAGTTACCGCGACGGCTCATACTGCCCTCCAGCC 18833 ||||||| || || ||||||||||| |||||||| || || ||||| || || || Sbjct 147 AACTTTCCGCTACCGCGTTGTCATGGCAGTTACCACGCCGACTCATGCTACCAAGCAAGT 206 Query 18834 CGTGTGATTTCAGGAACGACTGCCACTCATAGCTTGTGTACTGACTGCCTTG 18885 | | ||||||||| |||||| ||| ||| || | || || ||||| Sbjct 207 TATTGGTTTTCAGGAAGCTCTGCCAGTCACCGCTGCTGAATTGGCTACCTTG 258 Score = 80.6 bits (88), Expect = 7e-11 Identities = 115/161 (71%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 18887 TCAGAATGAACCAGCACC---TGCTTTTGAGGATTACGTCGCCACACGGCCATCAGAAGT 18943 || || |||| || |||| |||||| || || || ||||| |||||||| || | Sbjct 1650 TCTGAGTGAATCATCACCCCCTGCTTT---GGCTTGCGGCGCCAAACGGCCATTAGCAAC 1706 Query 18944 GCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACCAGCCAATAACTTTGCGC 19003 |||| | | | || | |||||| | |||| ||||||||| || || || | ||| Sbjct 1707 GCATCAATAGCCAGGTCGCTGGTCATCTGCGGCTTCATTGACCAACCGATTACCTGCCGC 1766 Query 19004 GAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTC 19044 |||||||| || | ||||| |||| ||||| |||||| || Sbjct 1767 GAGAACAGATCGAGCACCACCGCCAAATACAACCAGCCCTC 1807 >seq11269 Length=54388 Score = 114 bits (126), Expect = 3e-21 Identities = 418/645 (65%), Gaps = 41/645 (6%) Strand=Plus/Plus Query 844 TTTGGCTGGGTCAATAAAGGCACCCGGTTGCGCCGCTTCCGGGAGGTGTACACCGAAATC 903 |||||||||||||| || | |||| | |||| | ||||| |||| ||| || || Sbjct 12857 TTTGGCTGGGTCAAGAAGGACACCGGCAAGCGCAGGTTCCGCGAGGCCTACGAAGAGATT 12916 Query 904 CCCCGTAAGAACGGCAAATCAGCAATCTCTGCCGGTGTTGCCCTGTATTGTTTTGCCTGT 963 ||| | |||||||| ||||| || | ||| | | | || | || ||| Sbjct 12917 CCCAGGAAGAACGGGAAATCGGCCCGCCTTGCTGCACGAGGTATTTACTTGTTCGCCGCA 12976 Query 964 GATAACGAGTTTGGCGCGGAAGTGTATTCCGGTGCCACGACAGAGAAACAGGCGTGGGAA 1023 ||| ||||| || || || || |||||||| ||||| || ||||| ||||||| || Sbjct 12977 GATGGCGAGTCGGGAGCCGAGGTCTATTCCGGCGCCACCACCGAGAAGCAGGCGTTCGAG 13036 Query 1024 GTCTTTCGCCCGGCGCGACTGATGTGTAA-ACGC---ACACCCATGCTGACGGAAGCG-T 1078 || ||||||||||| | ||||| | | | || | | || || || || || | Sbjct 13037 GTATTTCGCCCGGCTTGGATGATGGCTCACAAGCTGGAGAACC----TG-CGCAACCGGT 13091 Query 1079 TCGGGATTGAGGTTAACGCCTCAAACATGAACCGT----CC-----------GGAGGATG 1123 |||| || ||| || | | | ||||| | || |||||| Sbjct 13092 TCGGCATCGAGCTTTCTGGAAATCAGAAGAACCCTGGCCCCATGTTCGTCATGGAGGACA 13151 Query 1124 GCGCGCGGTTTGAACCGCTGATCGGCAACCCAGGTGATGGTTCATCACCCCACTGTGCCG 1183 || ||| || || ||||||||||||| || |||||| | ||||| |||| Sbjct 13152 TGTCGAAGTTCGAGACGGTGATCGGCAACCCCGGGGATGGTGCGAGTCCCCATGCTGCCC 13211 Query 1184 TGGTTGATGAATATCACGAGCATGCCACCGATGC---GCTTTATACCACAATGCTTACCG 1240 |||| || || || ||||| || | ||| || || | | |||||| ||| || | Sbjct 13212 TGGTGGACGAGTACCACGAACACGACACAGACGCCTTGGTGGATACCA---TGCAGACAG 13268 Query 1241 GGATGGGGGCGCGACGTCAGCCACTGATGTGGGCCATCACCACCGCCGGGTACAACATTG 1300 | |||||||||||| |||||| || ||| | ||| || || | |||| || | | Sbjct 13269 GCATGGGGGCGCGAGAACAGCCATTGCTGTCGATCATTACGACGTCGGGGTCAAATCTCG 13328 Query 1301 AGGGGCCGTGCTACGACAAACGGCGGGAAGTCATCGAGATGCTCAACGGCTCGGTGCCTA 1360 |||||| || ||||| || || ||||| || ||| || ||| | || | | | | Sbjct 13329 GGGGGCCATGTTACGAGAAGCGCCGGGACGTGATCCGCATTCTCGAGGG---GCAGACGA 13385 Query 1361 ACGATGA-AC--TGTTCGGGATCATCTATACCGTTGATGAAGGTGACGACTGGACCGACC 1417 |||||| || | |||||||||||||| || | || || | ||| ||| |||| Sbjct 13386 TCGATGAGACGATCTTCGGGATCATCTACACGATCGACGAGGATGATTCGTGGGATGACC 13445 Query 1418 CG--CAGGTGCTGGAAAAAGCCAATCCAAATATTGGCGTGTCGGT 1460 || ||| ||| || |||||||| ||| || |||||||| Sbjct 13446 CGGCCAG--CCTGATCAAGGCCAATCCGAATTACGGAGTGTCGGT 13488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126831958991040