Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022750.1 Length=33628 Score E Sequences producing significant alignments: (Bits) Value seq5373 98.7 2e-16 >seq5373 Length=95907 Score = 98.7 bits (108), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 16780 CGTGACGGTTTCCGCTTCTGGGGTAACCGTACCTGCTCTGATGACCCGCTGTTCCTCTTT 16839 ||||| || ||||| || |||||| ||||| || |||| ||| || | || ||| Sbjct 44906 CGTGATGGCTTCCGTTTTTGGGGTTCACGTACTTGTTCTGCTGATCCTTTATTTGCATTT 44847 Query 16840 GAAAACTACACCCGCACCGCGCAGGTGCTGGCCGACACGATGGCTGAGGCGCACATGTGG 16899 ||||||| || || || || || || || | |||||||||||||| | || |||||| Sbjct 44846 GAAAACTCAACTCGTACAGCTCAAGTTTTGTCGGACACGATGGCTGAAGGTCATATGTGG 44787 Query 16900 GCGGTGGACAAGCCCATCACTGCAACGCTGATTCGC----GACATCGTTGACGGCATCAA 16955 || || || || | | |||| | | || || |||||||| || ||||| || Sbjct 44786 GCAGTTGATAA----ACCTTTGCACCCATCTTTGGCGAAAGACATCGTAGAGGGCATTAA 44731 Query 16956 TGCCAAATTCCGTGAGCT 16973 ||||||||||||||| || Sbjct 44730 TGCCAAATTCCGTGATCT 44713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107257943164880