Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022771.1 Length=156648 Score E Sequences producing significant alignments: (Bits) Value seq131746 84.2 2e-11 seq36072 82.4 8e-11 seq29690 82.4 8e-11 seq19269 82.4 8e-11 seq128 82.4 8e-11 seq100 82.4 8e-11 >seq131746 Length=1327 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 31567 CATTGTCCCATAGCTCAAT-GGTAGAGCGCCCGACTGTTAATCGGAAGGTTGCTGGTTCG 31625 |||| |||||||||||| | ||||||||| | ||||||||||| | |||| |||||||| Sbjct 315 CATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCG 374 Query 31626 AGCCCAGCTGGGACAG 31641 ||||||| ||||| || Sbjct 375 AGCCCAGGTGGGAGAG 390 >seq36072 Length=12768 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 31568 ATTGTCCCATAGCTCAAT-GGTAGAGCGCCCGACTGTTAATCGGAAGGTTGCTGGTTCGA 31626 ||| |||||||||||| | ||||||||| | ||||||||||| | |||| ||||||||| Sbjct 12768 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 12709 Query 31627 GCCCAGCTGGGACAG 31641 |||||| ||||| || Sbjct 12708 GCCCAGGTGGGAGAG 12694 >seq29690 Length=17010 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 31568 ATTGTCCCATAGCTCAAT-GGTAGAGCGCCCGACTGTTAATCGGAAGGTTGCTGGTTCGA 31626 ||| |||||||||||| | ||||||||| | ||||||||||| | |||| ||||||||| Sbjct 169 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 110 Query 31627 GCCCAGCTGGGACAG 31641 |||||| ||||| || Sbjct 109 GCCCAGGTGGGAGAG 95 >seq19269 Length=29301 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 31568 ATTGTCCCATAGCTCAAT-GGTAGAGCGCCCGACTGTTAATCGGAAGGTTGCTGGTTCGA 31626 ||| |||||||||||| | ||||||||| | ||||||||||| | |||| ||||||||| Sbjct 29295 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 29236 Query 31627 GCCCAGCTGGGACAG 31641 |||||| ||||| || Sbjct 29235 GCCCAGGTGGGAGAG 29221 >seq128 Length=380166 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 31568 ATTGTCCCATAGCTCAAT-GGTAGAGCGCCCGACTGTTAATCGGAAGGTTGCTGGTTCGA 31626 ||| |||||||||||| | ||||||||| | ||||||||||| | |||| ||||||||| Sbjct 179236 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 179295 Query 31627 GCCCAGCTGGGACAG 31641 |||||| ||||| || Sbjct 179296 GCCCAGGTGGGAGAG 179310 >seq100 Length=411593 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 31568 ATTGTCCCATAGCTCAAT-GGTAGAGCGCCCGACTGTTAATCGGAAGGTTGCTGGTTCGA 31626 ||| |||||||||||| | ||||||||| | ||||||||||| | |||| ||||||||| Sbjct 268042 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 267983 Query 31627 GCCCAGCTGGGACAG 31641 |||||| ||||| || Sbjct 267982 GCCCAGGTGGGAGAG 267968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500016544020480