Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022966.1 Length=88135 Score E Sequences producing significant alignments: (Bits) Value seq53614 354 5e-93 seq48790 134 8e-27 >seq53614 Length=7104 Score = 354 bits (392), Expect = 5e-93 Identities = 383/502 (76%), Gaps = 4/502 (1%) Strand=Plus/Plus Query 71626 TGGTGAGCGAGCAAGAGGGAGGTAATGATGTCAGCAATCATCAGTGAGTGCGGTAAATAT 71685 || |||||||||| |||||||| || ||||||||||||||||||||| ||||| ||| Sbjct 5847 TGCTGAGCGAGCATGAGGGAGGGAACGATGTCAGCAATCATCAGTGAATGCGGCCGGTAT 5906 Query 71686 CGGTACCGCCTGGATCGAGACTGTTCGCCACCCTTTGAGGGTAGCAAGGTGTACGCCTAC 71745 || ||||| ||||| ||||| || | | || |||||||| ||||| |||| ||| || Sbjct 5907 CGTTACCGACTGGAGCGAGAATGCTGCCTGCCTTTTGAGGGCAGCAAAGTGTTCGCATAT 5966 Query 71746 TTCGGTGTTAACCCCAGCACGGCGGATGCCAGTACAGACGATGCTACCGTCCGAAAGTGG 71805 || || || ||||| |||||||||||||||| || |||||||| || || || |||||| Sbjct 5967 TTTGGGGTCAACCCAAGCACGGCGGATGCCAATATTGACGATGCGACGGTGCGCAAGTGG 6026 Query 71806 CGAGGCTTCACCGAGAGAAATGGAGGCCATAGGTTCATTGTGGGGAACGTCTTCTGCTAT 71865 ||||| ||||| | | |||||||| ||| | ||||| || || |||||||||||||| Sbjct 6027 CGAGGGTTCACTCTGCGCAATGGAGGTCATCGATTCATCGTCGGCAACGTCTTCTGCTAC 6086 Query 71866 CGTGCCACCGACGTGAAAGAGCTGCGAAAAGTGGACGACCCGTTTGGACCTGAAAGCGTG 71925 || || || |||||||||||||| || | ||| || || || ||||| |||| Sbjct 6087 CGCGCTACTGACGTGAAAGAGCTTCGCGGACAGGATGATCCTTTCGGACCACTTAGCGCC 6146 Query 71926 GATTACTTCCAGTCCATCCTGGCGGAAGCTGACATCCTGGTACCGTGTTGGGGTAGCCTG 71985 || |||||| |||| | || || || ||||| ||||| || || ||||| ||||| Sbjct 6147 GACCACTTCCGCGCCATAGTCGCTGATGCCGACATTCTGGTTCCTTGCTGGGGAAGCCTT 6206 Query 71986 TCAAAGCTACC-CAAGCATCTTCGTGGGTGC-CCTCCTCAACTTCTTCAGTGGATGCTCC 72043 || || | || | || |||| ||| ||||| ||| |||| |||||||| ||| || ||| Sbjct 6207 TCGAAAATGCCGCGAG-ATCTGCGT-GGTGCTCCTGCTCAGCTTCTTCAATGGCTGATCC 6264 Query 72044 GCTCTGGTAAGCCTGTCATGTGCTTCGGGCTCACCCGGTGTGATCAACCAAAGCACCCCC 72103 | || || ||||| || ||||||||||| |||| || | || ||||||||||| | Sbjct 6265 GATCAGGAAAGCCGGTAATGTGCTTCGGAATCACTGCCTGCGGACAGCCAAAGCACCCTC 6324 Query 72104 TTATGCTGGGGTACGACACTCC 72125 | ||||| || |||||||| || Sbjct 6325 TGATGCTTGGATACGACACACC 6346 >seq48790 Length=255 Score = 134 bits (148), Expect = 8e-27 Identities = 101/119 (85%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 69513 CGTGCGCTCGGCTTGCACCCGTCTCAGGAGCGCGGTTTCGCATGGTCCTACCTACTGGCC 69572 |||||||| || |||| ||| || |||||||||||||||||||| || || ||||| Sbjct 254 CGTGCGCTTGGTTTGCGTCCGAACCAAGAGCGCGGTTTCGCATGGTCATATCTGCTGGCG 195 Query 69573 TCGATCAAGTCATGCCGGAAGGCGTCCGAGGATGCCGCCCAGGCTCAGCACAGCGTGCC 69631 ||||||||||||||| |||||| ||||| ||| |||||||||||||||||||||||| Sbjct 194 TCGATCAAGTCATGCGTGAAGGCCTCCGAAGATAGCGCCCAGGCTCAGCACAGCGTGCC 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 281287955244416