Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022968.1 Length=148567 Score E Sequences producing significant alignments: (Bits) Value seq95965 102 8e-17 seq5373 82.4 7e-11 seq7 82.4 7e-11 >seq95965 Length=2703 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 101315 ATGAAAGTATATCTGGTAGGTGGCGCAGTACGTGACGGTTTGCTTGGTCGTGAAGTTCAT 101374 ||| | || ||| | || ||||||||||| | |||| | ||||||||||| ||| | Sbjct 1849 ATGCAGGTTTATTTAGTCGGTGGCGCAGTCAGAGACGCCCTACTTGGTCGTGACGTTAAA 1908 Query 101375 GACCGTGACTACGTGGTTGTGGGTGCAACGCACGAAGAAATGATCAATAAAGGTT-TCAC 101433 || || ||||| ||||| || ||||| |||| ||| || |||||| |||||| ||| Sbjct 1909 GAACGCGACTATGTGGTAGTTGGTGCCACGCCAGAACAACTGATCAGCCAAGGTTATCA- 1967 Query 101434 CCAGGTTGGCGCTGCTTTTCCAGTATACCTGCATCCTGAAACCAACGAAGAGTATGCTTT 101493 || ||||| | |||||| |||| | || || ||| || ||||| ||||| | Sbjct 1968 ACAAGTTGGTAAAGATTTTCCGGTATTTTTACACCCACAAAGTAAAGAAGAATATGCGCT 2027 Query 101494 GGCCCGTACCGAGCGCAA 101511 ||| || |||||||| || Sbjct 2028 GGCGCGCACCGAGCGAAA 2045 >seq5373 Length=95907 Score = 82.4 bits (90), Expect = 7e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 68469 ATTGCTGGATGCAAAGCCTTTATCTTTCAGACGTTCAAAGATGTCTTTTGCACGAGCAAC 68528 |||| |||| ||||||||||| ||| || || || ||||| | || |||||| | | Sbjct 20231 ATTGTTGGAAGCAAAGCCTTTGGCTTCCAAACCTTTTAAGATATTTTGTGCACGTTCTAG 20172 Query 68529 AGTGATAGAGTCACCGTAGATCAGGCCAACATGACTATCCAGAACTTTGTAACCCTTGGA 68588 || || |||||||| ||||||| || ||| | || ||| ||||| || || | | Sbjct 20171 GGTAATCGAGTCACCATAGATCAAACCGACACGCTCATTCAGTACTTTATAGCCTTGAGC 20112 Query 68589 GTTAACTTCACCACCAAAGATTTCCCACAGACACTGGATTGCACCTTT 68636 | || || ||||| |||||||| | ||| || | ||||||||| Sbjct 20111 TGTTTCTGTGCCGCCAAAAATTTCCCATAAACATTGCACTGCACCTTT 20064 >seq7 Length=747525 Score = 82.4 bits (90), Expect = 7e-11 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 66028 TGTTTGGTGGGGCATGAAGGATTCGAACCTTCGACCTTCGGCTTAAGAGGCCGCTACTCT 66087 ||||||||||| ||||| ||||||||||| |||||| ||| |||| || ||||| |||| Sbjct 152136 TGTTTGGTGGGTCATGATGGATTCGAACCATCGACCAACGGATTAAAAGTCCGCTGCTCT 152195 Query 66088 AACCGCTGAGTTAAT-ACCC 66106 | | |||||| |||| |||| Sbjct 152196 ACCAGCTGAGCTAATGACCC 152215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474215603505120