Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022970.1 Length=88097 Score E Sequences producing significant alignments: (Bits) Value seq85907 210 1e-49 seq53614 131 9e-26 >seq85907 Length=3443 Score = 210 bits (232), Expect = 1e-49 Identities = 134/146 (92%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 72035 CCTAAGACCGTCCTCTCCCTGTTGGACGAGATCGACAGACTCAAGGTGGAGAACGTTTCG 72094 || |||||||||||| ||||| |||||||||||||||| |||||| |||||||| || Sbjct 2534 CCCAAGACCGTCCTCGCCCTGCTGGACGAGATCGACAGGCTCAAGACGGAGAACGAGGCG 2475 Query 72095 CTGCGTGGAGCGCTACAGGCCGTAGTGGATGATCCAACCTGGCGCAGTAACGACAACACC 72154 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2474 CTGCGGGGAGCGCTACAGGCCGTAGTGGATGATCCAACCTGGCGCAGCAACGACAACACC 2415 Query 72155 CTGTGGCCTAAGATCATCAAGGCAAT 72180 |||||||| ||||||||||||||||| Sbjct 2414 CTGTGGCCGAAGATCATCAAGGCAAT 2389 >seq53614 Length=7104 Score = 131 bits (144), Expect = 9e-26 Identities = 86/95 (91%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 70277 ATGAGTGAGGTGAAGCGGTTCTGGTGCGATGAGGCGCGGAACATCCGGTGCGTCCGTGAG 70336 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4870 ATGAGTAAGGTTCAGCGGTTCTGGTGCGATGAGGCGCGGAACATCCGGTGCGTCCGTGAG 4929 Query 70337 GATGACTACGACGCCCTCGCCTCCGAGTCCCAGGC 70371 ||||||| |||||| |||| ||||| ||||||| Sbjct 4930 GATGACTTCGACGCACTCGAAGCCGAGGCCCAGGC 4964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 281166622354168