Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_022974.1 Length=88255 Score E Sequences producing significant alignments: (Bits) Value seq53614 356 1e-93 >seq53614 Length=7104 Score = 356 bits (394), Expect = 1e-93 Identities = 381/501 (76%), Gaps = 2/501 (0%) Strand=Plus/Plus Query 71734 TGGTGAGCGAGCAAGAGGGAGGTAATGATGTCAGCAATCATCAGTGAGTGCGGTAAATAT 71793 || |||||||||| |||||||| || ||||||||||||||||||||| ||||| ||| Sbjct 5847 TGCTGAGCGAGCATGAGGGAGGGAACGATGTCAGCAATCATCAGTGAATGCGGCCGGTAT 5906 Query 71794 CGGTACCGCCTGGATCGAGATTGTTCGCCACCCTTTGAGGGTAGCAAGGTGTACGCCTAC 71853 || ||||| ||||| ||||| || | | || |||||||| ||||| |||| ||| || Sbjct 5907 CGTTACCGACTGGAGCGAGAATGCTGCCTGCCTTTTGAGGGCAGCAAAGTGTTCGCATAT 5966 Query 71854 TTCGGTGTTAACCCCAGCACGGCGGATGCCAGTACAGACGATGCTACCGTCCGAAAGTGG 71913 || || || ||||| |||||||||||||||| || |||||||| || || || |||||| Sbjct 5967 TTTGGGGTCAACCCAAGCACGGCGGATGCCAATATTGACGATGCGACGGTGCGCAAGTGG 6026 Query 71914 CGAGGCTTCACCGAGAGAAATGGAGGCCATAGGTTCATTGTGGGGAACGTCTTCTGCTAT 71973 ||||| ||||| | | |||||||| ||| | ||||| || || |||||||||||||| Sbjct 6027 CGAGGGTTCACTCTGCGCAATGGAGGTCATCGATTCATCGTCGGCAACGTCTTCTGCTAC 6086 Query 71974 CGTGCCACCGACGTGAAAGAGCTGCGAAAAGTGGACGACCCGTTTGGACCTGAAAGCGTG 72033 || || || |||||||||||||| || | ||| || || || ||||| |||| Sbjct 6087 CGCGCTACTGACGTGAAAGAGCTTCGCGGACAGGATGATCCTTTCGGACCACTTAGCGCC 6146 Query 72034 GATTACTTCCAGTCCATCCTGGCGGAAGCTGACATCCTGGTACCGTGTTGGGGTAGCCTG 72093 || |||||| |||| | || || || ||||| ||||| || || ||||| ||||| Sbjct 6147 GACCACTTCCGCGCCATAGTCGCTGATGCCGACATTCTGGTTCCTTGCTGGGGAAGCCTT 6206 Query 72094 TCAAAGCTACCCAAACATCTTCGTGGGTGC-CCTCCTCAACTTCTTCAGTGGATGCTCCG 72152 || || | || | |||| ||| ||||| ||| |||| |||||||| ||| || |||| Sbjct 6207 TCGAAAATGCCGCGAGATCTGCGT-GGTGCTCCTGCTCAGCTTCTTCAATGGCTGATCCG 6265 Query 72153 CTCTGGTAAGCCTGTCATGTGCTTCGGGCTCACCCGGTGTGATCAACCAAAGCACCCCCT 72212 || || ||||| || ||||||||||| |||| || | || ||||||||||| || Sbjct 6266 ATCAGGAAAGCCGGTAATGTGCTTCGGAATCACTGCCTGCGGACAGCCAAAGCACCCTCT 6325 Query 72213 TATGCTGGGGTACGACACTCC 72233 ||||| || |||||||| || Sbjct 6326 GATGCTTGGATACGACACACC 6346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 281671111739936