Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023005.1 Length=41386 Score E Sequences producing significant alignments: (Bits) Value seq34826 192 2e-44 >seq34826 Length=13225 Score = 192 bits (212), Expect = 2e-44 Identities = 243/332 (73%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 31370 TATGACTTCCTGCACAAGCAGCTCTGGTTTGAATCGGAGTTCAACCCTAAGGCCAAGTCC 31429 || ||| ||||||||||||| |||| ||||| |||||||||||| ||| | | Sbjct 8071 TACGACCTCCTGCACAAGCAACTCTTCAAGGAATCCTCGTTCAACCCTAAAGCCGTGAGC 8012 Query 31430 CCTACGGGTCCTCGCGGTATCGGACAGTTCACCAAGGCCACGGGTAATGCCTACGGTCTG 31489 |||||||| |||||||||||||| ||||||||||||||||| || || |||||||| ||| Sbjct 8011 CCTACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCCTACGGCCTG 7952 Query 31490 GTGACTGACGAGGACTTCAATGACCCCCTGAAATCCATTGACGCCGCTGCGCGCCACATG 31549 | || || ||||||||| |||||| || ||||| ||||| || || || |||||| Sbjct 7951 ATCACCGAGGAGGACTTCTTCGACCCCGCCAAGTCCATCGACGCAGCCGCTCGGCACATG 7892 Query 31550 AAGGACATCCTCACGTCCACCAAAGGGGACTACCTCAAGGCAGCCCTCGCGTACAACCAA 31609 |||| ||||| | | |||| || ||| | || ||||| ||| |||||||||| Sbjct 7891 CGCGACAACCTCAAGGCGTCCAACGGCGACGAGCTGAAGGCGCTCCTGATGTACAACCAA 7832 Query 31610 GGAGGTGGCCGTTTGGGTCGCCCACAGTTGGCCGCTCTGGACGCTGGGGATACTTCAC-- 31667 || | ||||| |||| ||| ||| | | || ||| ||||| ||||| | Sbjct 7831 GGGGCTGGCCCGGTGGGCCGCAAGCAGCTCGAAGCCTACGACCGTGGGG--ACTTCTCTG 7774 Query 31668 AGATCACTCACGAGGGCATGAACTACATGCGC 31699 | || | | ||||||||| |||||||||| Sbjct 7773 GGGTCTCCGAAGAGGGCATGGGCTACATGCGC 7742 Score = 122 bits (134), Expect = 2e-23 Identities = 189/270 (70%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 11755 TCAAGGCGATATGCCGTGGTTCGAGGATGGGAACGGCAACGTCGTGTTCAAGTTCAAGTG 11814 ||||||||| |||| | |||| | || |||||| || ||||||||| | Sbjct 8642 TCAAGGCGACCTGCCCTTCATCGACAACGGTGACGGCACGGTGACCTTCAAGTTCGTCGG 8583 Query 11815 CTACGCCTCCTATGAGAAGGACGGCGAGAAGCGTGAGATCAACCTGAAGGTTGCGAACTC 11874 || ||| ||| |||||||||||||||| | |||| |||| || | || | Sbjct 8582 CTGGGCCAGCTACGAGAAGGACGGCGAGATGATCCCGATCCCCCTGCGTGTCGTTGACGC 8523 Query 11875 GATGGGCAAGAAGCTCGACGTTGTTCCGAACATCTCGGGCGGCTCCGAGTTGAAAGTCCG 11934 | ||||||| ||| | ||| |||||||||||||| ||||||||| || ||||| Sbjct 8522 CAAGGGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTCCGAGGGCAAGGTCCG 8463 Query 11935 ATTCAGCGTATTCCCGTACAAGTGGAACACTGCTGTCGGCGCCTCGATCAAGCTGCAACT 11994 ||| | | |||| ||| |||||| | | || |||||||| | ||||| ||||| Sbjct 8462 CTTCTCCATCGTCCCCTACGGCTGGAACCCGACCGTGGGCGCCTCCGTGAAGCTCCAACT 8403 Query 11995 GGATGGCGTCATGCTGGTCAAGCTGGTCGA 12024 ||| ||| |||||||| ||| |||||||| Sbjct 8402 GGAAGGCTTCATGCTGACCAAACTGGTCGA 8373 Score = 95.1 bits (104), Expect = 3e-15 Identities = 561/884 (63%), Gaps = 41/884 (5%) Strand=Plus/Minus Query 33472 GGGCACGCCCATGACCCCGGAAGGAATCCAGCGGGCAGTCGAGGACTACGC--ACGGAAC 33529 || || ||| |||||| | || | | ||| |||||||||| | ||||| ||| || Sbjct 5957 GGCCAAGCCGATGACCACTGAGGAGCTTCAGGCGGCAGTCGAGAAGTACGCCAACG--AC 5900 Query 33530 AAGGCCTATGGCATCAGCCACACTCAGGACTTCAACCGGTCGCAC-CTCGTGGACGATCA 33588 ||||| ||||||||||||||| | | |||| || | | | | || || || || || Sbjct 5899 AAGGCGTATGGCATCAGCCACTCCGACCGCTTC-ACGGCTGACTCGCTGGTAGAGGAGCA 5841 Query 33589 AGTGAACGGACTGGTCGGTGCC--GAGAACAACAATTTCTTGGAAGGCCGACACCTCTTC 33646 |||| |||| || | | ||| ||||||||| | | | | |||| || |||||||| Sbjct 5840 CCTGAA-GGACGGGGCAG-GCCTGGAGAACAACGACTACCTCGAAGCTCGTAACCTCTTC 5783 Query 33647 GACTCAGACATGCCGAT-ACCGCTTGTGGGAGGC-GCCGAGTTCTCAGTGAACGATCTCC 33704 ||||| || ||| |||| ||||| || | | ||| |||| | ||||| || |||| Sbjct 5782 GACTCCGATATGTCGATCACCGCGCCTGACGGCCAGCC--GTTCGCTGTGAATGACCTCC 5725 Query 33705 GAAGCTTCGACCTGACCAGCATTACGCCGGGATATGATCGTCGCGTTAACGGGGATATTG 33764 || |||| ||||| | | ||| || || || | || ||||| || || | Sbjct 5724 GAGACTTCAACCTGCTTCGGGTGGTCCCGCAGTACGACCGCAGGGTCAACGGTGACATCG 5665 Query 33765 GGATCATGGGAGCCACGGGCCAATCAACTGAGGCCCTTAAGGACCGCATTGTGGCCATGG 33824 ||||||| | ||| || | || | |||| ||| || ||| || | Sbjct 5664 CCCTCATGGGTGGCACCGGGAAGGACACCCGGACCCTGAAGAAC------ATGGTCAACG 5611 Query 33825 GCGTGGGTAATGAGTCC-CGCAAG--GAATACGC------GGC-----GCTTCA-AGACG 33869 | || | | |||| | || | || |||| ||| | ||| |||| Sbjct 5610 GAATGCGCCAAAGGTCCGCCCACGGCGAGGACGCTCGGGAGGCTGAATACCTCATGGACG 5551 Query 33870 CTGTGAAGCTTCTCACAGGGCGTGCTCGGCGTGACCCTGATGGCGTGATGGCAACCATTG 33929 | ||||| | ||||| || || |||||||| || ||||| ||| ||| ||| | | Sbjct 5550 CCCTGAAGATGCTCACCGGACGCGCTCGGCGCGATCCTGACGGCACCTGGGCGACCGTAG 5491 Query 33930 CGCGGTCCCTTACGGACATGTCGTTCCTCGCCAAGAACGCCTACATGGGCATTCAAGGCA 33989 |||| ||| | | ||||| ||| | | |||||||||||||||||| | || || Sbjct 5490 CGCGATCCTTGAACGACATCGGGTTTGCCACGAAGAACGCCTACATGGGCGTACAGAACA 5431 Query 33990 TCACCGAGACTGCCGCACTGGTGACTAAAGGACACACTGCGATGCTGCTGAAAGGTGTAC 34049 |||||||| | || | ||| | || || ||| |||||| ||||| || | | Sbjct 5430 TCACCGAGGCCGCGTCCCTGATCGTCAAGGGCCACCAGAAGATGCTCCTGAAGGGCATCC 5371 Query 34050 CGTTCTTGAACCAGATGATGACCGTAGGATCGAAGGCGACCCCTGAGTTCCTTGCGGACA 34109 || | | || || | || | ||| | ||| | | || | | ||| | Sbjct 5370 CGATGCTCAAGAAGTGGTCCACGGCAGGGACAAAGCTGGAGCTGGACGACATCAAGGAGA 5311 Query 34110 TGCACGGTCTGGTGTTCGGTCGTGAGCTGGACAACCTGATCCGCCCTAAGCGTGCTGACA 34169 ||||||| ||| | ||||| ||||||||| || | || || || | || |||| Sbjct 5310 TGCACGGCCTGATCTTCGGCAAGGAGCTGGACGACATCATTCGGCCCACCCGGCAGGACA 5251 Query 34170 TCGTGATGCGTCTCCGTGACCATGCCGATGCTTCGCCTGCTATGGCTCAGGCCGTTGGCT 34229 ||||| |||||| | | ||| ||| || | ||| || || | Sbjct 5250 TCGTGGACAACCTCCGTCGCTCGGAGAATG--GGGCCGCCT----CGCAGATCGCAGGGT 5197 Query 34230 CGCTGAAGTGGGCGACTGGCGAAATGGCTGCTCGCTGGCCTCTGACCCGGTTCCTCACTG 34289 | || |||| || ||||| || || || ||||| | || | || || ||||| || Sbjct 5196 CCCTCAAGTTCGCCACTGGTGAGATCGCCGCTCGGTCCCCGTTCACTTGGCTCCTCCGTG 5137 Query 34290 AGTCATCCAACTACATCGCTGATGCTGGCCGTCAAGGCGTGCTG 34333 ||||| |||||||||| || || ||||| ||||| | |||| Sbjct 5136 AGTCAGGCAACTACATCATGGACGCGGGCCGCCAAGGGGCGCTG 5093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132030408871136