Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2234 150 3e-31 seq32926 104 4e-17 >seq2234 Length=154088 Score = 150 bits (166), Expect = 3e-31 Identities = 169/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || ||||| || || || | || ||||||| | || Sbjct 12107 TGCAAATTTTTGTTAAAACCCTCACTGGAAAGACCATCACCTTAGAAGTAGAACCAAGCG 12166 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| |||| ||||| ||| |||||||||||||||||| ||||| | Sbjct 12167 ATACAATTGAAAATGTCAAAACAAAAATTCAAGATAAAGAAGGCATTCCACCAGATCAGC 12226 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || |||||||| |||||||| | || ||| | || | | ||||| || | Sbjct 12227 AAAGGCTGATTTTTGCTGGTAAACAGCTTGAAGATGGGCGTACCCTGTCGGATTACAACA 12286 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | |||||||| || || ||||| |||| | ||||||||||||| Sbjct 12287 TCCAAAAAGAGTCTACACTCCATCTAGTTCTCAGATTAAGAGGAGG 12332 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| || ||||||| ||||||||||| | || || |||| | | Sbjct 11879 TGCAAATTTTTGTAAAGACTCTAACAGGTAAAACAATTACATTAGAAGTCGAACCAAGTG 11938 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||||| || |||||||| ||||| || ||||| | Sbjct 11939 ATACCATTGAAAATGTTAAAGCAAAAATCCAGGACAAAGAAGGAATTCCCCCAGATCAGC 11998 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | |||||||| ||||| ||| |||| ||| | || | | |||||||| | Sbjct 11999 AGCGTTTAATTTTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCGGATTATAACA 12058 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| ||| | ||| | || ||| || | |||||||| Sbjct 12059 TTCAAAAAGAATCTACTCTGCATCTGGTTTTAAGACTCAGAGGAGG 12104 Score = 123 bits (136), Expect = 4e-23 Identities = 170/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| |||| || | ||||| || || || || | || || |||| || || Sbjct 10967 TGCAAATATTCGTAAAGACTCTGACAGGGAAGACCATAACGTTAGAAGTTGAACCTAGCG 11026 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| |||| ||||| || |||||||||||| || || || || | Sbjct 11027 ACACAATAGAAAATGTCAAAACAAAAATCCAGGATAAAGAAGGCATCCCTCCAGACCAGC 11086 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || || || || ||||| | || ||| | | || | | ||||| |||| Sbjct 11087 AGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGTCGTACTCTGTCTGATTACAATA 11146 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | || |||||||| ||| | || || || | ||| | |||||||||| ||||||| Sbjct 11147 TCCAGAAAGAATCCACTCTTCACTTGGTTCTGCGACTTAGAGGAGGTATGCAAATATT 11204 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| |||| || ||||| || || | || ||||| | || | Sbjct 11423 TGCAAATTTTCGTGAAAACCCTAACTGGCAAAACCATCACCTTGGAAGTAGAGCCTAGTG 11482 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || |||| || ||| ||||| ||| |||||||| || || || ||||||| Sbjct 11483 ACACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAAGAAGGTATCCCCCCAGATCAAC 11542 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| ||||| || || || ||| | | || | | ||||| || | Sbjct 11543 AGAGGCTAATTTTTGCTGGTAAGCAGTTGGAAGATGGTCGTACTCTTTCTGATTACAACA 11602 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | |||||||| | | || |||||||||| Sbjct 11603 TCCAAAAAGAATCTACATTACATTTAGTTCTGAGGTTGAGAGGAGGTA 11650 Score = 123 bits (136), Expect = 4e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || || ||||| || || | || || |||| || | Sbjct 12647 TGCAAATTTTTGTTAAAACCCTGACTGGCAAAACCATCACCTTAGAAGTTGAACCTAGTG 12706 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| ||||| || ||||||||| ||||| || ||||| | Sbjct 12707 ATACAATTGAGAATGTGAAAGCCAAAATCCAGGATAAAGAAGGTATTCCCCCAGATCAGC 12766 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || ||||| ||||||||| | || ||| ||||| || |||||||||||| Sbjct 12767 AGAGGTTAATCTTTGCTGGTAAACAACTTGAAGATGGCAGAACTTTGTCAGATTATAATA 12826 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || ||||| ||| | || || || | | || |||||||| Sbjct 12827 TCCAGAAGGAATCTACTCTACACTTGGTTCTCAGGTTGAGAGGAGG 12872 Score = 120 bits (132), Expect = 5e-22 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 146057 AGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATAA 146116 ||| ||||| |||||| |||| || |||| | ||||| ||| | ||||| ||| ||| Sbjct 12444 AGGTAAAACCATTACTCTTGAAGTTGAACCAAGTGATACCATTGAGAATGTGAAAGCTAA 12503 Query 146117 AATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACA 146176 ||| ||| ||||||||| ||||| || ||||| || || | || || ||||||||||| Sbjct 12504 AATTCAAGATAAAGAAGGTATTCCTCCAGATCAGCAGAGGTTAATCTTCGCAGGTAAACA 12563 Query 146177 ATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTT 146236 | | || ||| |||| || | || ||||| || || |||||||| ||| | ||| | Sbjct 12564 ACTTGAAGATGGCCGAACCCTATCGGACTATAACATTCAGAAAGAATCAACTCTGCATCT 12623 Query 146237 AGTATT 146242 ||| || Sbjct 12624 AGTCTT 12629 Score = 105 bits (116), Expect = 1e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 146057 AGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAATAA 146116 ||||||||||||||| | || || || | | ||||||||| |||| || ||| || Sbjct 13264 AGGAAAAACAATTACACTAGAAGTCGAGCCCAGTGATACTATTGAAAACGTTAAAGCAAA 13323 Query 146117 AATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACA 146176 || ||| || ||||| || ||||| ||||||||| | ||||| ||||| |||||||| Sbjct 13324 GATCCAAGACAAGGAAGGAATACCACCAGATCAACAACGTCTCATCTTTGCTGGTAAACA 13383 Query 146177 ATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTT 146236 || || ||| ||||| | | || |||||||| || || || || ||| | || || Sbjct 13384 GTTGGAAGATGGAAGAACCCTGTCTGACTATAATATTCAGAAGGAGTCTACTCTACACTT 13443 Query 146237 AGTATT 146242 || || Sbjct 13444 GGTTTT 13449 Score = 96.9 bits (106), Expect = 5e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | || |||||||| || ||| |||| || || | || | Sbjct 10739 TGCAGATCTTTGTGAAGACTCTGACTGGAAAAACCATCACTCTTGAAGTGGAGCCTAGTG 10798 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || || || ||| |||||| || || ||||| ||||| | Sbjct 10799 ACACAATCGAAAATGTGAAGGCCAAGATTCAAGATAAAGAGGGTATCCCACCAGATCAGC 10858 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||| || || || | || ||| | || | ||||||| |||| Sbjct 10859 AGAGGCTGATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGTACTCTTTCAGATTACAATA 10918 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||||||||| ||| | || | || | ||| | |||||||| | ||||||| Sbjct 10919 TCCAAAAAGAATCCACTCTTCACCTGGTTCTCCGACTGAGAGGAGGAATGCAAATATT 10976 >seq32926 Length=14205 Score = 104 bits (114), Expect = 4e-17 Identities = 149/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| | ||||| ||||||||||||||||||| | || || || | | | Sbjct 14112 TGCAGATATTCGTCAAAACTCTAACAGGAAAAACAATTACACTAGAAGTCGAGCCCAGTG 14053 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 || ||||| |||| || ||| || || ||| || ||||| || ||||| ||||||| Sbjct 14052 ATGCTATTGAAAACGTTAAAGCAAAGATCCAAGACAAGGAAGGAATACCACCAGATCAAC 13993 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| || || || ||| ||||| | | || ||||||| Sbjct 13992 AACGTCTCATTTTTGCTGG-------TTGGAAGATGGAAGAACCCTGTCTGACTATAATA 13940 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | || || || || ||| | || || || || Sbjct 13939 TTCAGAAGGAGTCTACTGTACACTTGGTTTT 13909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784395206409120