Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2234 152 4e-32 >seq2234 Length=154088 Score = 152 bits (168), Expect = 4e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | ||| || ||||| | || ||||||||||| ||||| ||||| | | Sbjct 11648 CCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAA 11589 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || | || || |||||| | || | || || ||||| || || Sbjct 11588 AGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGG 11529 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| ||||||||||| |||||| | |||||| |||||| |||||| | | ||||| Sbjct 11528 ATACCTTCTTTGTCTTG-AATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGCTCTAC 11470 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || ||||||||||||| |||||| || || || ||||| Sbjct 11469 TTCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCAT 11422 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| || || |||| ||||| |||||||||||||| || || ||||| | Sbjct 10965 TCCTCCTCTCAGTCGGAGAACCAGGTGAAGAGTGGATTCTTTTTGGATATTGTAATCTGA 10906 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || || ||| || || || || |||||| | |||| || |||||||| || || Sbjct 10905 AAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGTGG 10846 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||||||||||| ||||| ||| || | || ||| |||| | |||||| | | || | Sbjct 10845 GATACCCTCTTTATCTTG-AATCTTGGCCTTCACATTTTCGATTGTGTCACTAGGCTCCA 10787 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||||| || ||||| ||||| | || || ||||| |||||||| Sbjct 10786 CTTCAAGAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 10738 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || || | || || | ||| || || || |||||||| ||||| ||||||| Sbjct 12332 CCTCCTCTTAATCTGAGAACTAGATGGAGTGTAGACTCTTTTTGGATGTTGTAATCCGAC 12273 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || || ||||| |||||| | |||| ||||||||||| || ||| Sbjct 12272 AGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCTGGTGGA 12213 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTT-GACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| ||||| ||||||||||| |||| |||| | || || ||||||| Sbjct 12212 ATGCCTTCTTTATCTTG-AATTTTTGTTTTGACATTTTCAATTGTATCGCTTGGTTCTAC 12154 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || || || ||||| | |||||||||||| || ||||| Sbjct 12153 TTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAAATTTGCAT 12106 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| |||||||| ||||||||||| || |||| | ||| | ||| Sbjct 10721 AGAACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTTCCATCT 10662 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | |||||| |||||| | ||||||| ||| ||||| || ||||| || |||||||| Sbjct 10661 TCCAATTGTTTTCCAGCAAAGATCAATCGTTGTTGATCTGGAGGAATTCCTTCTTTGTCC 10602 Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | || ||| |||| | || ||| | | || || || ||||| || || Sbjct 10601 TG-AATCTTGGCCTTTACATTTTCAATGGTATCACTAGGCTCAACCTCTAGAGTGATGGT 10543 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || | ||||| ||||| ||||||||||| Sbjct 10542 CTTGCCGGTGAGAGTTTTCACAAAAATCTGCATTTT 10507 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || ||||| || || || ||||| || || || |||||||| | Sbjct 12872 CCTCCTCTCAACCTGAGAACCAAGTGTAGAGTAGATTCCTTCTGGATATTATAATCTGAC 12813 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || |||||||| |||||| | || || || |||||||| || ||| Sbjct 12812 AAAGTTCTGCCATCTTCAAGTTGTTTACCAGCAAAGATTAACCTCTGCTGATCTGGGGGA 12753 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||| || || | ||| ||| ||| | || | || ||| | |||| ||| Sbjct 12752 ATACCTTCTTTATCCTGGATTTTGGCTTTCACATTCTCAATTGTATCACTAGGTTCAACT 12693 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| | |||||||||||| || ||||| Sbjct 12692 TCTAAGGTGATGGTTTTGCCAGTCAGGGTTTTAACAAAAATTTGCAT 12646 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || | ||||| ||||| ||||| ||||||||||| || || || ||||| | Sbjct 11192 CCTCCTCTAAGTCGCAGAACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAC 11133 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || || ||||| || || | |||||||| ||||| || || || Sbjct 11132 AGAGTACGACCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGAGGG 11073 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||| || || | |||| ||||||| |||||| ||||| | |||| ||| Sbjct 11072 ATGCCTTCTTTATCCTGGATTTTTGTTTTGACATTTTCTATTGTGTCGCTAGGTTCAACT 11013 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || | ||||| || || || || | || || || ||||| |||||| Sbjct 11012 TCTAACGTTATGGTCTTCCCTGTCAGAGTCTTTACGAATATTTGCATT 10965 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||| ||| || || ||||||||||||||||||||||||| | || || ||| || Sbjct 12086 ACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGGCCATCTTCT 12027 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| || |||||| | || || | |||||||| || ||||| || |||||||| || Sbjct 12026 AGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCTTTGTCCTGG 11967 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | |||| ||| ||| |||| | || ||| |||| ||||| | || || ||||| Sbjct 11966 ATTTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGTAATTGTTTTA 11907 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||| || || ||||| || ||||| Sbjct 11906 CCTGTTAGAGTCTTTACAAAAATTTGCAT 11878 Score = 116 bits (128), Expect = 3e-21 Identities = 134/178 (75%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || || |||||||| ||||||||||| |||| | ||| || ||| || ||||| Sbjct 12621 ATGCAGAGTTGATTCTTTCTGAATGTTATAGTCCGATAGGGTTCGGCCATCTTCAAGTTG 12562 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| || || | || || || |||||||| || |||||||| ||||| ||||| ||||| Sbjct 12561 TTTACCTGCGAAGATTAACCTCTGCTGATCTGGAGGAATACCTTCTTTATCTTG-AATTT 12503 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCC 29759 | | ||| ||| | || | || ||| |||| ||||||||||| || ||||| || Sbjct 12502 TAGCTTTCACATTCTCAATGGTATCACTTGGTTCAACTTCAAGAGTAATGGTTTTACC 12445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384373017393276