Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023558.1 Length=38966 Score E Sequences producing significant alignments: (Bits) Value seq34826 138 3e-28 >seq34826 Length=13225 Score = 138 bits (152), Expect = 3e-28 Identities = 211/297 (71%), Gaps = 3/297 (1%) Strand=Plus/Minus Query 30931 AGGA-CTTGCGGCTGCGGTAGATAAGTACGCCAATGATAAGGCTTACGGCATCTCCCACA 30989 |||| ||| ||| || || || ||||||||||| || ||||| || |||||| |||| Sbjct 5937 AGGAGCTTCAGGCGGCAGTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACT 5878 Query 30990 CCGACCTATTCGAGCGCTCG-TCTGTCATGGAAGAGAACATCAACGGTCTGGTGGGTCTG 31048 |||||| ||| | ||| || | | || ||| || | || | || || ||| Sbjct 5877 CCGACCGCTTCACG-GCTGACTCGCTGGTAGAGGAGCACCTGAAGGACGGGGCAGGCCTG 5819 Query 31049 GAGAACAACAACTTCCTTGAGGCCCGTAACCTGTTCGATAGCGATATGTCTATCATCCTG 31108 ||||||||| ||| ||| || || |||||||| ||||| ||||||||| |||| | | Sbjct 5818 GAGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCG 5759 Query 31109 CCAAACGGTCAGCCGTTCAGTGTGAACAGTCTCCGTGAGTGGGACATGGATAAGATTGTC 31168 || |||| ||||||||| |||||| ||||| || | || || | | | ||| Sbjct 5758 CCTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTC 5699 Query 31169 CCGGCGTACAACCGTCGAGTCAATGGGGACATTGCTATCATGGCTGGGACCGGGAAG 31225 ||| |||| |||| | ||||| || ||||| || |||||| ||| ||||||||| Sbjct 5698 CCGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAG 5642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124302983373696