Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq11470 206 1e-48 seq21230 199 2e-46 >seq11470 Length=53368 Score = 206 bits (228), Expect = 1e-48 Identities = 258/354 (73%), Gaps = 0/354 (0%) Strand=Plus/Minus Query 37811 CATCAACGTGGCTTTGATCAGATTGATTGGGTTATTAATGAAATTAAAACTAACCCTACA 37870 || ||| ||| ||||| || ||| | ||| | | |||||||| ||||| || || | Sbjct 34580 CAACAAAATGGTTTTGACCAAATTAAATGGCTCGTCAATGAAATCAAAACCAATCCGAAT 34521 Query 37871 TCACGCCGTCTAATTGTCAATGGATGGAATCCACATGAAGTAGATAAGGCAGCATTGCCA 37930 ||||| || |||| || || ||||||||| |||||| || ||||| || || ||| Sbjct 34520 TCACGTCGCTTAATCGTTTCGGGCTGGAATCCAAATGAAGCAGGTAAGGTTGCTTTACCA 34461 Query 37931 CCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGTTATAT 37990 ||||||||||| ||||||| || ||||| | || ||||| || || | ||| Sbjct 34460 CCTTGTCATACCCTGTTCCAATTTTTTGTGCATGATAACAAACTCTCTTGCCAACTTTAT 34401 Query 37991 CAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGTTGCTT 38050 ||||||||||| ||| | || |||||||| |||||||||||||| |||||||| | || Sbjct 34400 CAACGTAGTGCAGATGTATTTTTAGGTGTGCCATTTAATATTGCTAGCTATGCCCTACTC 34341 Query 38051 ACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGGACTGGTGGT 38110 || ||||| | || || ||||| ||||| ||||| || ||||| |||||||||||| Sbjct 34340 ACCCATATGATTGCACAAGTCTGTGGTTTAGATGTTGGGGACTTTGTTTGGACTGGTGGT 34281 Query 38111 GTAGTTCACCTGTACAGTAATCACCTTGAGCAAGCTAAAAAACAATTAAGTCGT 38164 | ||| | || || ||| |||||||||| ||| |||| | | |||| Sbjct 34280 GATACACACTTATATGCAAACCACTTTGAGCAAGCCAAATTACAACTTACTCGT 34227 >seq21230 Length=25512 Score = 199 bits (220), Expect = 2e-46 Identities = 226/302 (75%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 37811 CATCAACGTGGCTTTGATCAGATTGATTGGGTTATTAATGAAATTAAAACTAACCCTACA 37870 || ||| |||||| ||||| || | ||| |||| |||||||| || || || || | Sbjct 8848 CAACAAAATGGCTTCGATCAAATCAAATGGCTTATCAATGAAATCAAGACCAATCCCAAT 8789 Query 37871 TCACGCCGTCTAATTGTCAATGGATGGAATCCACATGAAGTAGATAAGGCAGCATTGCCA 37930 ||||| |||||||| || ||| ||||| || |||||| || ||| | ||||| || Sbjct 8788 TCACGTCGTCTAATCGTTTCTGGTTGGAACCCTAATGAAGCAGGTAAAGTGGCATTACCG 8729 Query 37931 CCTTGTCATACATTGTTCCAGTTCTTTGTA---GAGAATGGAAAACTAAGCTGTCAGTTA 37987 ||||| ||||| |||||||| ||||| ||| || ||| ||||| || || | Sbjct 8728 CCTTGCCATACGTTGTTCCAATTCTTCGTACAAGACAAT---AAACTCTCATGCCAACTG 8672 Query 37988 TATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGTTG 38047 |||||||| ||||||||| | ||| |||||||||||||||||||||| || ||||| | Sbjct 8671 TATCAACGCAGTGCTGATGTATTCCTAGGTGTTCCATTTAATATTGCGAGTTATGCCCTA 8612 Query 38048 CTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGGACTGGT 38107 ||||| ||||| | || || |||||| || | |||||||| ||||||||||| || Sbjct 8611 CTTACGCATATGATTGCGCAAGTATGTGGTTTGGGTGTTGGTGACTTTGTCTGGACAGGC 8552 Query 38108 GG 38109 || Sbjct 8551 GG 8550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248263058301388