Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq379 93.3 5e-14 seq26 86.0 8e-12 >seq379 Length=288837 Score = 93.3 bits (102), Expect = 5e-14 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 152586 ATGGCGGAATTGGTAGACGCGCTGGTTTTAGGTACCAGTGTCTTATGACGTGGAGGTTCA 152645 |||||||||||||||||||||||||||| ||||||||||| | | | ||||||||||| Sbjct 264758 ATGGCGGAATTGGTAGACGCGCTGGTTTCAGGTACCAGTGCCGCAAGGCGTGGAGGTTCG 264817 Query 152646 AGTCCTCTT 152654 ||||||||| Sbjct 264818 AGTCCTCTT 264826 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 152586 ATGGCGGAATTGGTAGACGCGCTGGTTTTAGGTACCAGTGTCTTATGACGTGGAGGTTCA 152645 |||||||||||||||||||||||||||| ||||||||||| | | | ||||||||||| Sbjct 264678 ATGGCGGAATTGGTAGACGCGCTGGTTTCAGGTACCAGTGCCGCAAGGCGTGGAGGTTCG 264737 Query 152646 AGTC 152649 |||| Sbjct 264738 AGTC 264741 >seq26 Length=549101 Score = 86.0 bits (94), Expect = 8e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 152587 TGGCGGAATTGGTAGACGCGCTGGTTTTAGGTACCAGTGTCTTATGACGTGGAGGTTCAA 152646 ||||| |||||||||||||||| |||| |||||| |||||| ||||||||||||||| Sbjct 116292 TGGCGAAATTGGTAGACGCGCTAGTTTCAGGTACTAGTGTCGCGAGACGTGGAGGTTCAA 116351 Query 152647 GTCCTCT 152653 ||||||| Sbjct 116352 GTCCTCT 116358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604302662081760