Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023602.1 Length=50781 Score E Sequences producing significant alignments: (Bits) Value seq1 114 4e-21 >seq1 Length=1655743 Score = 114 bits (126), Expect = 4e-21 Identities = 152/210 (72%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 6788 AACAGTCCCGGCGGGATCGTGTTCGACGGGATCGCGATCATGAACGCGCTGAAGCGGCAT 6847 ||||| |||||||| || ||||||| | |||||||| || ||| | ||||| || Sbjct 161221 AACAGCCCCGGCGGCTCGGTCTTCGACGCGGTCGCGATCCACAATGCGATCAAGCGCCAC 161162 Query 6848 CCGGCGCGGATCGTCAC---CCGGATCGACGGGCTCGCCGCGTCGGCCGCGTCGTTTATC 6904 || | | ||||| | |||||||||| ||||||| |||||||| || | ||| Sbjct 161161 GAGG---GCACGGTCACGGTCTGGATCGACGGTATCGCCGCCTCGGCCGCCTCCTACATC 161105 Query 6905 GCGATGGCCGGCGACGAGATTCAGACGTCGAAGTATGCCGAGATGATGATTCACGAAGCG 6964 |||||||| ||||||||||| | | | || | ||| ||||||| ||||| || Sbjct 161104 GCGATGGCGGGCGACGAGATCGTCATGCCCGAGAACGCCTTCCTGATGATCCACGACCCG 161045 Query 6965 CGCGGCGTCGTGATGGGAACGGCCGACGAC 6994 |||| |||||||||| |||||||| ||| Sbjct 161044 TCCGGCCTCGTGATGGGCACGGCCGAGGAC 161015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162030062816776