Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq3662 89.7 7e-13 seq163424 86.0 9e-12 >seq3662 Length=120183 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/136 (75%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 99997 ACGGTTCCACAGTGAAACCATCAGCTGCCCGTTGTAGTCTGCATCAATGACGCCCGTCAG 100056 ||||||||| | |||||||||||| | || | |||||||| |||||| | || | Sbjct 7221 ACGGTTCCAAACTGAAACCATCAGTTCGCCTTGGTAGTCTGAATCAATCAAACCGACTAA 7280 Query 100057 GTTACCCAGTACGATACCGTGTTTGTGACCCAGACCGGAGCGAGGGTGAATCAATCCCAC 100116 ||||||| ||| ||||| ||||| || || ||||| || || || ||| |||||| | Sbjct 7281 ATTACCCAATACAATACCATGTTTATGCCCAAGACCCGAACGTGGTAAAATTAATCCCGC 7340 Query 100117 GTAGTTTGGATTCTTC 100132 |||||||| ||||| Sbjct 7341 AAAGTTTGGA-TCTTC 7355 >seq163424 Length=1083 Score = 86.0 bits (94), Expect = 9e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 92154 CTGCCCACTCGTTCCAGATGGTAACCCCTTCTTTGGCCAACTCTCGGTTGTCCGTGGAAC 92213 |||||||||||| |||||||| || || | || || | ||| ||| || | Sbjct 951 CTGCCCACTCGTCCCAGATGGAGACGCCGTTTTCCTTCAGATACCGGATGTTGGTATCGC 892 Query 92214 CCTGCATGAACCAGAGCATCTCGTGAATGATGCTGCGCAAGTGAACTTTCTTGGTGGTGA 92273 |||||| ||||| |||| |||||| |||||| | ||| ||||||||||| | Sbjct 891 CCTGCAAAAACCACAGCAGCTCGTGGATGATGGACTTGAGATGACACTTCTTGGTGGTCA 832 Query 92274 CTAGCGGAAACCCGTCCGCGAGGTTAAAGCGCATTTGGTGACCAAAGATACCATACGTTC 92333 | |||||||| || || || || | ||||||||| || || ||||| | || || || | Sbjct 831 CCAGCGGAAAGCCCTCGGCCAGATCAAAGCGCATCTGATGGCCAAACACACTGTAAGTGC 772 Query 92334 CG 92335 || Sbjct 771 CG 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 696982986457440